Coverage for biobb_dna/test/unitests/test_stiffness/test_stiffness.py: 93%

1# type: ignore 

2from biobb_common.tools import test_fixtures as fx 

3from biobb_dna.stiffness.average_stiffness import average_stiffness 

4from biobb_dna.stiffness.basepair_stiffness import basepair_stiffness 

5import platform 

6 

7 

8class TestAvgStiffness(): 

9 def setup_class(self): 

10 fx.test_setup(self, 'average_stiffness') 

11 

12 def teardown_class(self): 

13 fx.test_teardown(self) 

14 

15 def test_averagestiffness(self): 

16 returncode = average_stiffness( 

17 properties=self.properties, **self.paths) 

18 assert fx.not_empty(self.paths['output_csv_path']) 

19 assert fx.not_empty(self.paths['output_jpg_path']) 

20 assert fx.exe_success(returncode) 

21 if platform.system() == 'Darwin': 

22 assert fx.equal(self.paths['output_csv_path'], self.paths['ref_csv_output']) 

23 assert fx.equal(self.paths['output_jpg_path'], self.paths['ref_jpg_output']) 

24 

25 

26class TestBasePairStiffness(): 

27 def setup_class(self): 

28 fx.test_setup(self, 'basepair_stiffness') 

29 

30 def teardown_class(self): 

31 fx.test_teardown(self) 

32 

33 def test_basepairstiffness(self): 

34 returncode = basepair_stiffness( 

35 properties=self.properties, **self.paths) 

36 assert fx.not_empty(self.paths['output_csv_path']) 

37 assert fx.not_empty(self.paths['output_jpg_path']) 

38 assert fx.exe_success(returncode) 

39 if platform.system() == 'Darwin': 

40 assert fx.equal(self.paths['output_csv_path'], self.paths['ref_csv_output']) 

41 assert fx.equal(self.paths['output_jpg_path'], self.paths['ref_jpg_output'])