Coverage report: 58%

Files Functions Classes

coverage.py v7.9.1, created at 2025-06-20 07:21 +0000

File statements missing excluded coverage
biobb_common/biobb_common/__init__.py 2 0 0 100%
biobb_common/biobb_common/command_wrapper/__init__.py 0 0 0 100%
biobb_common/biobb_common/command_wrapper/cmd_wrapper.py 59 20 0 66%
biobb_common/biobb_common/configuration/__init__.py 0 0 0 100%
biobb_common/biobb_common/configuration/settings.py 93 21 0 77%
biobb_common/biobb_common/generic/__init__.py 0 0 0 100%
biobb_common/biobb_common/generic/biobb_object.py 218 99 0 55%
biobb_common/biobb_common/tools/__init__.py 0 0 0 100%
biobb_common/biobb_common/tools/file_utils.py 383 211 0 45%
biobb_common/biobb_common/tools/test_fixtures.py 271 178 0 34%
biobb_model/__init__.py 4 0 0 100%
biobb_model/model/__init__.py 15 0 0 100%
biobb_model/model/checking_log.py 44 14 0 68%
biobb_model/model/common.py 22 14 0 36%
biobb_model/model/fix_altlocs.py 49 15 0 69%
biobb_model/model/fix_amides.py 44 14 0 68%
biobb_model/model/fix_backbone.py 54 41 0 24%
biobb_model/model/fix_chirality.py 44 14 0 68%
biobb_model/model/fix_pdb.py 59 16 0 73%
biobb_model/model/fix_pdb_utils.py 530 189 0 64%
biobb_model/model/fix_side_chain.py 51 17 0 67%
biobb_model/model/fix_ssbonds.py 44 14 0 68%
biobb_model/model/mutate.py 55 17 0 69%
biobb_model/test/__init__.py 0 0 0 100%
biobb_model/test/unitests/test_model/test_checking_log.py 10 0 0 100%
biobb_model/test/unitests/test_model/test_fix_altlocs.py 11 0 0 100%
biobb_model/test/unitests/test_model/test_fix_amides.py 11 0 0 100%
biobb_model/test/unitests/test_model/test_fix_chirality.py 11 0 0 100%
biobb_model/test/unitests/test_model/test_fix_pdb.py 11 0 0 100%
biobb_model/test/unitests/test_model/test_fix_side_chain.py 11 0 0 100%
biobb_model/test/unitests/test_model/test_fix_ssbonds.py 11 0 0 100%
biobb_model/test/unitests/test_model/test_mutate.py 11 0 0 100%
setup.py 4 4 0 0%
Total 2132 898 0 58%

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