biobb_model/model/fix_pdb_utils.py

• 3 F821: undefined name 'first_cap_only' (and 2 similar)

  • Undefined name 'first_cap_only':

    516 atom.element = first_cap_only(atom.element)

  • Undefined name 'guess_name_element':

    519 atom.element = guess_name_element(atom.name)

  • Undefined name 'references':

    827 reference = references[uniprot_id]
• 3 E721: do not compare types, for exact checks use `is` / `is not`, for instance checks use `isinstance()`
  • 120 if type(self) != type(other):
  • 244 if type(new_chain) == str:
  • 742 if type(forced_references) == str:
• 2 W504: line break after binary operator
  • 132 self.name == other.name and
  • 133 self.number == other.number and