Coverage report: 94%

Files Functions Classes

coverage.py v7.12.0, created at 2025-11-20 11:00 +0000

File function   statements missing excluded   coverage
biobb_pdb_tools / __init__.py (no function)   4 0 0   100%
biobb_pdb_tools / pdb_tools / __init__.py (no function)   2 0 0   100%
biobb_pdb_tools / pdb_tools / biobb_pdb_chain.py Pdbchain.__init__   8 0 0   100%
biobb_pdb_tools / pdb_tools / biobb_pdb_chain.py Pdbchain.launch   15 1 0   93%
biobb_pdb_tools / pdb_tools / biobb_pdb_chain.py biobb_pdb_chain   1 0 0   100%
biobb_pdb_tools / pdb_tools / biobb_pdb_chain.py (no function)   13 1 0   92%
biobb_pdb_tools / pdb_tools / biobb_pdb_chainxseg.py Chainxseg.__init__   7 0 0   100%
biobb_pdb_tools / pdb_tools / biobb_pdb_chainxseg.py Chainxseg.launch   11 1 0   91%
biobb_pdb_tools / pdb_tools / biobb_pdb_chainxseg.py biobb_pdb_chainxseg   1 0 0   100%
biobb_pdb_tools / pdb_tools / biobb_pdb_chainxseg.py (no function)   13 1 0   92%
biobb_pdb_tools / pdb_tools / biobb_pdb_delhetatm.py Delhetatm.__init__   7 0 0   100%
biobb_pdb_tools / pdb_tools / biobb_pdb_delhetatm.py Delhetatm.launch   11 1 0   91%
biobb_pdb_tools / pdb_tools / biobb_pdb_delhetatm.py biobb_pdb_delhetatm   1 0 0   100%
biobb_pdb_tools / pdb_tools / biobb_pdb_delhetatm.py (no function)   13 1 0   92%
biobb_pdb_tools / pdb_tools / biobb_pdb_fetch.py Pdbfetch.__init__   9 0 0   100%
biobb_pdb_tools / pdb_tools / biobb_pdb_fetch.py Pdbfetch.launch   14 3 0   79%
biobb_pdb_tools / pdb_tools / biobb_pdb_fetch.py biobb_pdb_fetch   1 0 0   100%
biobb_pdb_tools / pdb_tools / biobb_pdb_fetch.py (no function)   13 1 0   92%
biobb_pdb_tools / pdb_tools / biobb_pdb_fixinsert.py Pdbfixinsert.__init__   9 0 0   100%
biobb_pdb_tools / pdb_tools / biobb_pdb_fixinsert.py Pdbfixinsert.launch   15 1 0   93%
biobb_pdb_tools / pdb_tools / biobb_pdb_fixinsert.py biobb_pdb_fixinsert   1 0 0   100%
biobb_pdb_tools / pdb_tools / biobb_pdb_fixinsert.py (no function)   13 1 0   92%
biobb_pdb_tools / pdb_tools / biobb_pdb_keepcoord.py Pdbkeepcoord.__init__   7 0 0   100%
biobb_pdb_tools / pdb_tools / biobb_pdb_keepcoord.py Pdbkeepcoord.launch   11 1 0   91%
biobb_pdb_tools / pdb_tools / biobb_pdb_keepcoord.py biobb_pdb_keepcoord   1 0 0   100%
biobb_pdb_tools / pdb_tools / biobb_pdb_keepcoord.py (no function)   13 1 0   92%
biobb_pdb_tools / pdb_tools / biobb_pdb_merge.py Pdbmerge.__init__   7 0 0   100%
biobb_pdb_tools / pdb_tools / biobb_pdb_merge.py Pdbmerge.launch   23 2 0   91%
biobb_pdb_tools / pdb_tools / biobb_pdb_merge.py biobb_pdb_merge   1 0 0   100%
biobb_pdb_tools / pdb_tools / biobb_pdb_merge.py (no function)   16 1 0   94%
biobb_pdb_tools / pdb_tools / biobb_pdb_mkensemble.py Mkensemble.__init__   7 0 0   100%
biobb_pdb_tools / pdb_tools / biobb_pdb_mkensemble.py Mkensemble.launch   22 2 0   91%
biobb_pdb_tools / pdb_tools / biobb_pdb_mkensemble.py biobb_pdb_mkensemble   1 0 0   100%
biobb_pdb_tools / pdb_tools / biobb_pdb_mkensemble.py (no function)   16 1 0   94%
biobb_pdb_tools / pdb_tools / biobb_pdb_reres.py Pdbreres.__init__   8 0 0   100%
biobb_pdb_tools / pdb_tools / biobb_pdb_reres.py Pdbreres.launch   15 1 0   93%
biobb_pdb_tools / pdb_tools / biobb_pdb_reres.py biobb_pdb_reres   1 0 0   100%
biobb_pdb_tools / pdb_tools / biobb_pdb_reres.py (no function)   13 1 0   92%
biobb_pdb_tools / pdb_tools / biobb_pdb_seg.py Pdbseg.__init__   9 0 0   100%
biobb_pdb_tools / pdb_tools / biobb_pdb_seg.py Pdbseg.launch   15 1 0   93%
biobb_pdb_tools / pdb_tools / biobb_pdb_seg.py biobb_pdb_seg   1 0 0   100%
biobb_pdb_tools / pdb_tools / biobb_pdb_seg.py (no function)   13 1 0   92%
biobb_pdb_tools / pdb_tools / biobb_pdb_selaltloc.py Pdbselaltloc.__init__   8 0 0   100%
biobb_pdb_tools / pdb_tools / biobb_pdb_selaltloc.py Pdbselaltloc.launch   15 3 0   80%
biobb_pdb_tools / pdb_tools / biobb_pdb_selaltloc.py biobb_pdb_selaltloc   1 0 0   100%
biobb_pdb_tools / pdb_tools / biobb_pdb_selaltloc.py (no function)   13 1 0   92%
biobb_pdb_tools / pdb_tools / biobb_pdb_selchain.py Pdbselchain.__init__   8 0 0   100%
biobb_pdb_tools / pdb_tools / biobb_pdb_selchain.py Pdbselchain.launch   15 1 0   93%
biobb_pdb_tools / pdb_tools / biobb_pdb_selchain.py biobb_pdb_selchain   1 0 0   100%
biobb_pdb_tools / pdb_tools / biobb_pdb_selchain.py (no function)   13 1 0   92%
biobb_pdb_tools / pdb_tools / biobb_pdb_selres.py Pdbselres.__init__   8 0 0   100%
biobb_pdb_tools / pdb_tools / biobb_pdb_selres.py Pdbselres.launch   15 1 0   93%
biobb_pdb_tools / pdb_tools / biobb_pdb_selres.py biobb_pdb_selres   1 0 0   100%
biobb_pdb_tools / pdb_tools / biobb_pdb_selres.py (no function)   13 1 0   92%
biobb_pdb_tools / pdb_tools / biobb_pdb_splitmodel.py Pdbsplitmodel.__init__   8 0 0   100%
biobb_pdb_tools / pdb_tools / biobb_pdb_splitmodel.py Pdbsplitmodel.launch   24 6 0   75%
biobb_pdb_tools / pdb_tools / biobb_pdb_splitmodel.py biobb_pdb_splitmodel   1 0 0   100%
biobb_pdb_tools / pdb_tools / biobb_pdb_splitmodel.py (no function)   17 1 0   94%
biobb_pdb_tools / pdb_tools / biobb_pdb_splitseg.py Pdbsplitseg.__init__   7 0 0   100%
biobb_pdb_tools / pdb_tools / biobb_pdb_splitseg.py Pdbsplitseg.launch   24 6 0   75%
biobb_pdb_tools / pdb_tools / biobb_pdb_splitseg.py biobb_pdb_splitseg   1 0 0   100%
biobb_pdb_tools / pdb_tools / biobb_pdb_splitseg.py (no function)   17 1 0   94%
biobb_pdb_tools / pdb_tools / biobb_pdb_tidy.py Pdbtidy.__init__   8 0 0   100%
biobb_pdb_tools / pdb_tools / biobb_pdb_tidy.py Pdbtidy.launch   15 3 0   80%
biobb_pdb_tools / pdb_tools / biobb_pdb_tidy.py biobb_pdb_tidy   1 0 0   100%
biobb_pdb_tools / pdb_tools / biobb_pdb_tidy.py (no function)   13 1 0   92%
biobb_pdb_tools / pdb_tools / biobb_pdb_tofasta.py Pdbtofasta.__init__   8 0 0   100%
biobb_pdb_tools / pdb_tools / biobb_pdb_tofasta.py Pdbtofasta.launch   15 1 0   93%
biobb_pdb_tools / pdb_tools / biobb_pdb_tofasta.py biobb_pdb_tofasta   1 0 0   100%
biobb_pdb_tools / pdb_tools / biobb_pdb_tofasta.py (no function)   13 1 0   92%
biobb_pdb_tools / pdb_tools / biobb_pdb_uniqname.py Pdbuniqname.__init__   7 0 0   100%
biobb_pdb_tools / pdb_tools / biobb_pdb_uniqname.py Pdbuniqname.launch   11 1 0   91%
biobb_pdb_tools / pdb_tools / biobb_pdb_uniqname.py biobb_pdb_uniqname   1 0 0   100%
biobb_pdb_tools / pdb_tools / biobb_pdb_uniqname.py (no function)   13 1 0   92%
biobb_pdb_tools / test / __init__.py (no function)   0 0 0   100%
biobb_pdb_tools / test / unitests / test_pdb_tools / __init__.py (no function)   0 0 0   100%
biobb_pdb_tools / test / unitests / test_pdb_tools / test_pdb_chain.py TestPdbChain.setup_class   1 0 0   100%
biobb_pdb_tools / test / unitests / test_pdb_tools / test_pdb_chain.py TestPdbChain.teardown_class   2 0 0   100%
biobb_pdb_tools / test / unitests / test_pdb_tools / test_pdb_chain.py TestPdbChain.test_pdbchain   4 0 0   100%
biobb_pdb_tools / test / unitests / test_pdb_tools / test_pdb_chain.py (no function)   6 0 0   100%
biobb_pdb_tools / test / unitests / test_pdb_tools / test_pdb_chainxseg.py TestPdbChainxseg.setup_class   1 0 0   100%
biobb_pdb_tools / test / unitests / test_pdb_tools / test_pdb_chainxseg.py TestPdbChainxseg.teardown_class   2 0 0   100%
biobb_pdb_tools / test / unitests / test_pdb_tools / test_pdb_chainxseg.py TestPdbChainxseg.test_chainxseg   4 0 0   100%
biobb_pdb_tools / test / unitests / test_pdb_tools / test_pdb_chainxseg.py (no function)   6 0 0   100%
biobb_pdb_tools / test / unitests / test_pdb_tools / test_pdb_delhetatm.py TestPdbdelhetatm.setup_class   1 0 0   100%
biobb_pdb_tools / test / unitests / test_pdb_tools / test_pdb_delhetatm.py TestPdbdelhetatm.teardown_class   2 0 0   100%
biobb_pdb_tools / test / unitests / test_pdb_tools / test_pdb_delhetatm.py TestPdbdelhetatm.test_delhetatm   4 0 0   100%
biobb_pdb_tools / test / unitests / test_pdb_tools / test_pdb_delhetatm.py (no function)   6 0 0   100%
biobb_pdb_tools / test / unitests / test_pdb_tools / test_pdb_fetch.py TestPdbFetch.setup_class   1 0 0   100%
biobb_pdb_tools / test / unitests / test_pdb_tools / test_pdb_fetch.py TestPdbFetch.teardown_class   2 0 0   100%
biobb_pdb_tools / test / unitests / test_pdb_tools / test_pdb_fetch.py TestPdbFetch.test_pdbfetch   4 0 0   100%
biobb_pdb_tools / test / unitests / test_pdb_tools / test_pdb_fetch.py (no function)   6 0 0   100%
biobb_pdb_tools / test / unitests / test_pdb_tools / test_pdb_fixinsert.py TestFixInsert.setup_class   1 0 0   100%
biobb_pdb_tools / test / unitests / test_pdb_tools / test_pdb_fixinsert.py TestFixInsert.teardown_class   2 0 0   100%
biobb_pdb_tools / test / unitests / test_pdb_tools / test_pdb_fixinsert.py TestFixInsert.test_pdb_fixinsert   4 0 0   100%
biobb_pdb_tools / test / unitests / test_pdb_tools / test_pdb_fixinsert.py (no function)   6 0 0   100%
biobb_pdb_tools / test / unitests / test_pdb_tools / test_pdb_keepcord.py TestPdbKeepCoord.setup_class   1 0 0   100%
biobb_pdb_tools / test / unitests / test_pdb_tools / test_pdb_keepcord.py TestPdbKeepCoord.teardown_class   2 0 0   100%
biobb_pdb_tools / test / unitests / test_pdb_tools / test_pdb_keepcord.py TestPdbKeepCoord.test_pdbkeepcoord   4 0 0   100%
biobb_pdb_tools / test / unitests / test_pdb_tools / test_pdb_keepcord.py (no function)   6 0 0   100%
biobb_pdb_tools / test / unitests / test_pdb_tools / test_pdb_merge.py TestPdbMerge.setup_class   1 0 0   100%
biobb_pdb_tools / test / unitests / test_pdb_tools / test_pdb_merge.py TestPdbMerge.teardown_class   2 0 0   100%
biobb_pdb_tools / test / unitests / test_pdb_tools / test_pdb_merge.py TestPdbMerge.test_pdbmerge   4 0 0   100%
biobb_pdb_tools / test / unitests / test_pdb_tools / test_pdb_merge.py (no function)   6 0 0   100%
biobb_pdb_tools / test / unitests / test_pdb_tools / test_pdb_mkensemble.py TestPdbMkensemble.setup_class   1 0 0   100%
biobb_pdb_tools / test / unitests / test_pdb_tools / test_pdb_mkensemble.py TestPdbMkensemble.teardown_class   2 0 0   100%
biobb_pdb_tools / test / unitests / test_pdb_tools / test_pdb_mkensemble.py TestPdbMkensemble.test_mkensemble   4 0 0   100%
biobb_pdb_tools / test / unitests / test_pdb_tools / test_pdb_mkensemble.py (no function)   6 0 0   100%
biobb_pdb_tools / test / unitests / test_pdb_tools / test_pdb_reres.py TestPdbreres.setup_class   1 0 0   100%
biobb_pdb_tools / test / unitests / test_pdb_tools / test_pdb_reres.py TestPdbreres.teardown_class   2 0 0   100%
biobb_pdb_tools / test / unitests / test_pdb_tools / test_pdb_reres.py TestPdbreres.test_pdbreres   4 0 0   100%
biobb_pdb_tools / test / unitests / test_pdb_tools / test_pdb_reres.py (no function)   6 0 0   100%
biobb_pdb_tools / test / unitests / test_pdb_tools / test_pdb_seg.py TestPdbseg.setup_class   1 0 0   100%
biobb_pdb_tools / test / unitests / test_pdb_tools / test_pdb_seg.py TestPdbseg.teardown_class   2 0 0   100%
biobb_pdb_tools / test / unitests / test_pdb_tools / test_pdb_seg.py TestPdbseg.test_pdbseg   4 0 0   100%
biobb_pdb_tools / test / unitests / test_pdb_tools / test_pdb_seg.py (no function)   6 0 0   100%
biobb_pdb_tools / test / unitests / test_pdb_tools / test_pdb_selaltloc.py TestPdbSelAltLoc.setup_class   1 0 0   100%
biobb_pdb_tools / test / unitests / test_pdb_tools / test_pdb_selaltloc.py TestPdbSelAltLoc.teardown_class   2 0 0   100%
biobb_pdb_tools / test / unitests / test_pdb_tools / test_pdb_selaltloc.py TestPdbSelAltLoc.test_pdbselaltloc   4 0 0   100%
biobb_pdb_tools / test / unitests / test_pdb_tools / test_pdb_selaltloc.py (no function)   6 0 0   100%
biobb_pdb_tools / test / unitests / test_pdb_tools / test_pdb_selchain.py TestPdbSelChain.setup_class   1 0 0   100%
biobb_pdb_tools / test / unitests / test_pdb_tools / test_pdb_selchain.py TestPdbSelChain.teardown_class   2 0 0   100%
biobb_pdb_tools / test / unitests / test_pdb_tools / test_pdb_selchain.py TestPdbSelChain.test_pdb_selchain   4 0 0   100%
biobb_pdb_tools / test / unitests / test_pdb_tools / test_pdb_selchain.py (no function)   6 0 0   100%
biobb_pdb_tools / test / unitests / test_pdb_tools / test_pdb_selres.py TestPdbSelres.setup_class   1 0 0   100%
biobb_pdb_tools / test / unitests / test_pdb_tools / test_pdb_selres.py TestPdbSelres.teardown_class   2 0 0   100%
biobb_pdb_tools / test / unitests / test_pdb_tools / test_pdb_selres.py TestPdbSelres.test_pdb_selres   4 0 0   100%
biobb_pdb_tools / test / unitests / test_pdb_tools / test_pdb_selres.py (no function)   6 0 0   100%
biobb_pdb_tools / test / unitests / test_pdb_tools / test_pdb_splitmodel.py TestPdbpdbsplitmodel.setup_class   1 0 0   100%
biobb_pdb_tools / test / unitests / test_pdb_tools / test_pdb_splitmodel.py TestPdbpdbsplitmodel.teardown_class   2 0 0   100%
biobb_pdb_tools / test / unitests / test_pdb_tools / test_pdb_splitmodel.py TestPdbpdbsplitmodel.test_splitmodel   4 0 0   100%
biobb_pdb_tools / test / unitests / test_pdb_tools / test_pdb_splitmodel.py (no function)   6 0 0   100%
biobb_pdb_tools / test / unitests / test_pdb_tools / test_pdb_splitseg.py TestPdbpdbsplitseg.setup_class   1 0 0   100%
biobb_pdb_tools / test / unitests / test_pdb_tools / test_pdb_splitseg.py TestPdbpdbsplitseg.teardown_class   2 0 0   100%
biobb_pdb_tools / test / unitests / test_pdb_tools / test_pdb_splitseg.py TestPdbpdbsplitseg.test_splitseg   4 0 0   100%
biobb_pdb_tools / test / unitests / test_pdb_tools / test_pdb_splitseg.py (no function)   6 0 0   100%
biobb_pdb_tools / test / unitests / test_pdb_tools / test_pdb_tidy.py TestPdbTidy.setup_class   1 0 0   100%
biobb_pdb_tools / test / unitests / test_pdb_tools / test_pdb_tidy.py TestPdbTidy.teardown_class   2 0 0   100%
biobb_pdb_tools / test / unitests / test_pdb_tools / test_pdb_tidy.py TestPdbTidy.test_pdbtidy   4 0 0   100%
biobb_pdb_tools / test / unitests / test_pdb_tools / test_pdb_tidy.py (no function)   6 0 0   100%
biobb_pdb_tools / test / unitests / test_pdb_tools / test_pdb_tofasta.py TestPdbTidy.setup_class   1 0 0   100%
biobb_pdb_tools / test / unitests / test_pdb_tools / test_pdb_tofasta.py TestPdbTidy.teardown_class   2 0 0   100%
biobb_pdb_tools / test / unitests / test_pdb_tools / test_pdb_tofasta.py TestPdbTidy.test_pdbtofasta   4 0 0   100%
biobb_pdb_tools / test / unitests / test_pdb_tools / test_pdb_tofasta.py (no function)   6 0 0   100%
biobb_pdb_tools / test / unitests / test_pdb_tools / test_pdb_uniqname.py TestPdbUniqname.setup_class   1 0 0   100%
biobb_pdb_tools / test / unitests / test_pdb_tools / test_pdb_uniqname.py TestPdbUniqname.teardown_class   2 0 0   100%
biobb_pdb_tools / test / unitests / test_pdb_tools / test_pdb_uniqname.py TestPdbUniqname.test_pdbtofasta   4 0 0   100%
biobb_pdb_tools / test / unitests / test_pdb_tools / test_pdb_uniqname.py (no function)   6 0 0   100%
Total     932 54 0   94%

No items found using the specified filter.