Coverage report: 86%

Files Functions Classes

coverage.py v7.14.1, created at 2026-05-29 06:59 +0000

File function   statements missing excluded   coverage
biobb_pmx/__init__.py (no function)   4 0 0   100%
biobb_pmx/pmxbiobb/__init__.py (no function)   3 0 0   100%
biobb_pmx/pmxbiobb/common.py create_mutations_file   18 4 0   78%
biobb_pmx/pmxbiobb/common.py _from_string_to_list   8 8 0   0%
biobb_pmx/pmxbiobb/common.py (no function)   5 0 0   100%
biobb_pmx/pmxbiobb/pmxanalyse.py Pmxanalyse.__init__   24 0 0   100%
biobb_pmx/pmxbiobb/pmxanalyse.py Pmxanalyse.launch   68 13 0   81%
biobb_pmx/pmxbiobb/pmxanalyse.py pmxanalyse   1 0 0   100%
biobb_pmx/pmxbiobb/pmxanalyse.py (no function)   15 1 0   93%
biobb_pmx/pmxbiobb/pmxatom_mapping.py Pmxatom_mapping.__init__   24 1 0   96%
biobb_pmx/pmxbiobb/pmxatom_mapping.py Pmxatom_mapping.launch   63 28 0   56%
biobb_pmx/pmxbiobb/pmxatom_mapping.py pmxatom_mapping   1 0 0   100%
biobb_pmx/pmxbiobb/pmxatom_mapping.py (no function)   16 1 0   94%
biobb_pmx/pmxbiobb/pmxcreate_top.py Pmxcreate_top.__init__   16 1 0   94%
biobb_pmx/pmxbiobb/pmxcreate_top.py Pmxcreate_top.launch   40 1 0   98%
biobb_pmx/pmxbiobb/pmxcreate_top.py pmxcreate_top   1 0 0   100%
biobb_pmx/pmxbiobb/pmxcreate_top.py (no function)   17 1 0   94%
biobb_pmx/pmxbiobb/pmxgentop.py Pmxgentop.__init__   17 1 0   94%
biobb_pmx/pmxbiobb/pmxgentop.py Pmxgentop.launch   43 5 0   88%
biobb_pmx/pmxbiobb/pmxgentop.py pmxgentop   1 0 0   100%
biobb_pmx/pmxbiobb/pmxgentop.py (no function)   17 1 0   94%
biobb_pmx/pmxbiobb/pmxligand_hybrid.py Pmxligand_hybrid.__init__   20 1 0   95%
biobb_pmx/pmxbiobb/pmxligand_hybrid.py Pmxligand_hybrid.launch   45 15 0   67%
biobb_pmx/pmxbiobb/pmxligand_hybrid.py pmxligand_hybrid   1 0 0   100%
biobb_pmx/pmxbiobb/pmxligand_hybrid.py (no function)   16 1 0   94%
biobb_pmx/pmxbiobb/pmxmerge_ff.py Pmxmerge_ff.__init__   12 1 0   92%
biobb_pmx/pmxbiobb/pmxmerge_ff.py Pmxmerge_ff.launch   20 1 0   95%
biobb_pmx/pmxbiobb/pmxmerge_ff.py pmxmerge_ff   1 0 0   100%
biobb_pmx/pmxbiobb/pmxmerge_ff.py (no function)   18 1 0   94%
biobb_pmx/pmxbiobb/pmxmutate.py Pmxmutate.__init__   17 1 0   94%
biobb_pmx/pmxbiobb/pmxmutate.py Pmxmutate.launch   27 6 0   78%
biobb_pmx/pmxbiobb/pmxmutate.py pmxmutate   1 0 0   100%
biobb_pmx/pmxbiobb/pmxmutate.py (no function)   18 1 0   94%
biobb_pmx/test/__init__.py (no function)   0 0 0   100%
biobb_pmx/test/unitests/test_pmx/test_pmxanalyse.py TestPmxanalyse.setup_class   1 0 0   100%
biobb_pmx/test/unitests/test_pmx/test_pmxanalyse.py TestPmxanalyse.teardown_class   1 0 0   100%
biobb_pmx/test/unitests/test_pmx/test_pmxanalyse.py TestPmxanalyse.test_pmxanalyse   4 0 0   100%
biobb_pmx/test/unitests/test_pmx/test_pmxanalyse.py (no function)   6 0 0   100%
biobb_pmx/test/unitests/test_pmx/test_pmxatom_mapping.py TestPmxatomMapping.setup_class   1 0 0   100%
biobb_pmx/test/unitests/test_pmx/test_pmxatom_mapping.py TestPmxatomMapping.teardown_class   1 0 0   100%
biobb_pmx/test/unitests/test_pmx/test_pmxatom_mapping.py TestPmxatomMapping.test_pmxatom_mapping   5 0 0   100%
biobb_pmx/test/unitests/test_pmx/test_pmxatom_mapping.py (no function)   6 0 0   100%
biobb_pmx/test/unitests/test_pmx/test_pmxcreate_top.py TestPmxcreate_top.setup_class   1 0 0   100%
biobb_pmx/test/unitests/test_pmx/test_pmxcreate_top.py TestPmxcreate_top.teardown_class   1 0 0   100%
biobb_pmx/test/unitests/test_pmx/test_pmxcreate_top.py TestPmxcreate_top.test_pmxcreate_top   3 0 0   100%
biobb_pmx/test/unitests/test_pmx/test_pmxcreate_top.py (no function)   6 0 0   100%
biobb_pmx/test/unitests/test_pmx/test_pmxgentop.py TestPmxgentop.setup_class   1 0 0   100%
biobb_pmx/test/unitests/test_pmx/test_pmxgentop.py TestPmxgentop.teardown_class   1 0 0   100%
biobb_pmx/test/unitests/test_pmx/test_pmxgentop.py TestPmxgentop.test_pmxgentop   3 0 0   100%
biobb_pmx/test/unitests/test_pmx/test_pmxgentop.py (no function)   6 0 0   100%
biobb_pmx/test/unitests/test_pmx/test_pmxligand_hybrid.py TestPmxligandHybrid.setup_class   1 0 0   100%
biobb_pmx/test/unitests/test_pmx/test_pmxligand_hybrid.py TestPmxligandHybrid.teardown_class   1 0 0   100%
biobb_pmx/test/unitests/test_pmx/test_pmxligand_hybrid.py TestPmxligandHybrid.test_pmxligand_hybrid   9 0 0   100%
biobb_pmx/test/unitests/test_pmx/test_pmxligand_hybrid.py (no function)   6 0 0   100%
biobb_pmx/test/unitests/test_pmx/test_pmxmerge_ff.py TestPmxmerge_ff.setup_class   1 0 0   100%
biobb_pmx/test/unitests/test_pmx/test_pmxmerge_ff.py TestPmxmerge_ff.teardown_class   1 0 0   100%
biobb_pmx/test/unitests/test_pmx/test_pmxmerge_ff.py TestPmxmerge_ff.test_pmxmerge_ff   3 0 0   100%
biobb_pmx/test/unitests/test_pmx/test_pmxmerge_ff.py (no function)   6 0 0   100%
biobb_pmx/test/unitests/test_pmx/test_pmxmutate.py TestPmxmutate.setup_class   1 0 0   100%
biobb_pmx/test/unitests/test_pmx/test_pmxmutate.py TestPmxmutate.teardown_class   1 0 0   100%
biobb_pmx/test/unitests/test_pmx/test_pmxmutate.py TestPmxmutate.test_pmxmutate   3 0 0   100%
biobb_pmx/test/unitests/test_pmx/test_pmxmutate.py (no function)   6 0 0   100%
Total     684 94 0   86%

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