Coverage report: 72%

Files Functions Classes

coverage.py v7.9.1, created at 2025-06-19 13:23 +0000

File function statements missing excluded coverage
biobb_cp2k/__init__.py (no function) 4 0 0 100%
biobb_cp2k/cp2k/__init__.py (no function) 4 0 0 100%
biobb_cp2k/cp2k/common.py check_input_path 11 5 0 55%
biobb_cp2k/cp2k/common.py check_output_path 10 5 0 50%
biobb_cp2k/cp2k/common.py is_valid_file 2 0 0 100%
biobb_cp2k/cp2k/common.py (no function) 5 0 0 100%
biobb_cp2k/cp2k/cp2k_prep.py Cp2kPrep.__init__ 10 0 0 100%
biobb_cp2k/cp2k/cp2k_prep.py Cp2kPrep.iterdict 35 3 0 91%
biobb_cp2k/cp2k/cp2k_prep.py Cp2kPrep.parse_rec_def 43 0 0 100%
biobb_cp2k/cp2k/cp2k_prep.py Cp2kPrep.parse_pdb 41 0 0 100%
biobb_cp2k/cp2k/cp2k_prep.py Cp2kPrep.merge 25 25 0 0%
biobb_cp2k/cp2k/cp2k_prep.py Cp2kPrep.replace_coords 38 23 0 39%
biobb_cp2k/cp2k/cp2k_prep.py Cp2kPrep.check_data_params 4 0 0 100%
biobb_cp2k/cp2k/cp2k_prep.py Cp2kPrep.update 5 5 0 0%
biobb_cp2k/cp2k/cp2k_prep.py Cp2kPrep.launch 46 18 0 61%
biobb_cp2k/cp2k/cp2k_prep.py cp2k_prep 1 0 0 100%
biobb_cp2k/cp2k/cp2k_prep.py main 11 11 0 0%
biobb_cp2k/cp2k/cp2k_prep.py (no function) 26 1 0 96%
biobb_cp2k/cp2k/cp2k_run.py Cp2kRun.__init__ 12 0 0 100%
biobb_cp2k/cp2k/cp2k_run.py Cp2kRun.check_data_params 4 0 0 100%
biobb_cp2k/cp2k/cp2k_run.py Cp2kRun.launch 41 12 0 71%
biobb_cp2k/cp2k/cp2k_run.py cp2k_run 1 0 0 100%
biobb_cp2k/cp2k/cp2k_run.py main 11 11 0 0%
biobb_cp2k/cp2k/cp2k_run.py (no function) 19 1 0 95%
biobb_cp2k/test/unitests/test_cp2k/test_cp2k_prep.py TestCp2kPrep.setup_class 1 0 0 100%
biobb_cp2k/test/unitests/test_cp2k/test_cp2k_prep.py TestCp2kPrep.teardown_class 2 0 0 100%
biobb_cp2k/test/unitests/test_cp2k/test_cp2k_prep.py TestCp2kPrep.test_cp2k_prep 3 0 0 100%
biobb_cp2k/test/unitests/test_cp2k/test_cp2k_prep.py (no function) 6 0 0 100%
biobb_cp2k/test/unitests/test_cp2k/test_cp2k_run.py TestCp2kRun.setup_class 1 0 0 100%
biobb_cp2k/test/unitests/test_cp2k/test_cp2k_run.py TestCp2kRun.teardown_class 2 0 0 100%
biobb_cp2k/test/unitests/test_cp2k/test_cp2k_run.py TestCp2kRun.test_cp2k_run 4 0 0 100%
biobb_cp2k/test/unitests/test_cp2k/test_cp2k_run.py (no function) 6 0 0 100%
Total   434 120 0 72%

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