Coverage report: 72%

Files Functions Classes

coverage.py v7.10.4, created at 2025-10-21 09:54 +0000

File class statements missing excluded coverage
biobb_gromacs/__init__.py (no class) 4 0 0 100%
biobb_gromacs/gromacs/__init__.py (no class) 13 0 0 100%
biobb_gromacs/gromacs/common.py (no class) 204 46 0 77%
biobb_gromacs/gromacs/convert_tpr.py ConvertTpr 36 36 0 0%
biobb_gromacs/gromacs/convert_tpr.py (no class) 25 25 0 0%
biobb_gromacs/gromacs/editconf.py Editconf 42 6 0 86%
biobb_gromacs/gromacs/editconf.py (no class) 26 10 0 62%
biobb_gromacs/gromacs/genion.py Genion 58 8 0 86%
biobb_gromacs/gromacs/genion.py (no class) 31 13 0 58%
biobb_gromacs/gromacs/genrestr.py Genrestr 40 3 0 92%
biobb_gromacs/gromacs/genrestr.py (no class) 28 11 0 61%
biobb_gromacs/gromacs/gmxselect.py Gmxselect 42 11 0 74%
biobb_gromacs/gromacs/gmxselect.py (no class) 28 12 0 57%
biobb_gromacs/gromacs/grompp.py Grompp 53 14 0 74%
biobb_gromacs/gromacs/grompp.py (no class) 34 14 0 59%
biobb_gromacs/gromacs/grompp_mdrun.py GromppMdrun 43 1 0 98%
biobb_gromacs/gromacs/grompp_mdrun.py (no class) 39 21 0 46%
biobb_gromacs/gromacs/make_ndx.py MakeNdx 36 4 0 89%
biobb_gromacs/gromacs/make_ndx.py (no class) 28 11 0 61%
biobb_gromacs/gromacs/mdrun.py Mdrun 121 60 0 50%
biobb_gromacs/gromacs/mdrun.py (no class) 34 17 0 50%
biobb_gromacs/gromacs/pdb2gmx.py Pdb2gmx 106 23 0 78%
biobb_gromacs/gromacs/pdb2gmx.py (no class) 30 11 0 63%
biobb_gromacs/gromacs/solvate.py Solvate 43 7 0 84%
biobb_gromacs/gromacs/solvate.py (no class) 31 13 0 58%
biobb_gromacs/gromacs/trjcat.py Trjcat 39 5 0 87%
biobb_gromacs/gromacs/trjcat.py (no class) 28 10 0 64%
biobb_gromacs/gromacs_extra/__init__.py (no class) 4 0 0 100%
biobb_gromacs/gromacs_extra/append_ligand.py AppendLigand 106 34 0 68%
biobb_gromacs/gromacs_extra/append_ligand.py (no class) 30 12 0 60%
biobb_gromacs/gromacs_extra/ndx2resttop.py Ndx2resttop 94 26 0 72%
biobb_gromacs/gromacs_extra/ndx2resttop.py (no class) 29 12 0 59%
biobb_gromacs/test/__init__.py (no class) 0 0 0 100%
biobb_gromacs/test/unitests/test_gromacs/test_editconf.py TestEditconf 5 0 0 100%
biobb_gromacs/test/unitests/test_gromacs/test_editconf.py (no class) 6 0 0 100%
biobb_gromacs/test/unitests/test_gromacs/test_genion.py TestGenion 8 0 0 100%
biobb_gromacs/test/unitests/test_gromacs/test_genion.py (no class) 6 0 0 100%
biobb_gromacs/test/unitests/test_gromacs/test_genrestr.py TestGenrestr 11 0 0 100%
biobb_gromacs/test/unitests/test_gromacs/test_genrestr.py (no class) 7 0 0 100%
biobb_gromacs/test/unitests/test_gromacs/test_gmxselect.py TestGmxselect 6 0 0 100%
biobb_gromacs/test/unitests/test_gromacs/test_gmxselect.py (no class) 6 0 0 100%
biobb_gromacs/test/unitests/test_gromacs/test_grompp.py TestGrompp 6 0 0 100%
biobb_gromacs/test/unitests/test_gromacs/test_grompp.py (no class) 7 0 0 100%
biobb_gromacs/test/unitests/test_gromacs/test_grompp_mdrun.py TestGromppMdrun 9 0 0 100%
biobb_gromacs/test/unitests/test_gromacs/test_grompp_mdrun.py (no class) 7 0 0 100%
biobb_gromacs/test/unitests/test_gromacs/test_make_ndx.py TestMakeNdx 6 0 0 100%
biobb_gromacs/test/unitests/test_gromacs/test_make_ndx.py (no class) 6 0 0 100%
biobb_gromacs/test/unitests/test_gromacs/test_mdrun.py TestMdrun 9 0 0 100%
biobb_gromacs/test/unitests/test_gromacs/test_mdrun.py (no class) 7 0 0 100%
biobb_gromacs/test/unitests/test_gromacs/test_pdb2gmx.py TestPdb2gmx 8 0 0 100%
biobb_gromacs/test/unitests/test_gromacs/test_pdb2gmx.py (no class) 6 0 0 100%
biobb_gromacs/test/unitests/test_gromacs/test_solvate.py TestSolvate 8 0 0 100%
biobb_gromacs/test/unitests/test_gromacs/test_solvate.py (no class) 6 0 0 100%
biobb_gromacs/test/unitests/test_gromacs/test_trjcat.py TestSolvate 6 0 0 100%
biobb_gromacs/test/unitests/test_gromacs/test_trjcat.py (no class) 6 0 0 100%
biobb_gromacs/test/unitests/test_gromacs_extra/test_append_ligand.py TestAppendLigand 6 0 0 100%
biobb_gromacs/test/unitests/test_gromacs_extra/test_append_ligand.py (no class) 6 0 0 100%
biobb_gromacs/test/unitests/test_gromacs_extra/test_ndx2resttop.py TestNdx2resttop 5 0 0 100%
biobb_gromacs/test/unitests/test_gromacs_extra/test_ndx2resttop.py (no class) 6 0 0 100%
Total   1680 476 0 72%

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