Coverage report: 75%

Files Functions Classes

coverage.py v7.10.2, created at 2025-08-07 08:48 +0000

File function statements missing excluded coverage
biobb_haddock/__init__.py (no function) 3 0 0 100%
biobb_haddock/haddock/__init__.py (no function) 2 0 0 100%
biobb_haddock/haddock/capri_eval.py CapriEval.__init__ 10 0 0 100%
biobb_haddock/haddock/capri_eval.py CapriEval.launch 28 6 0 79%
biobb_haddock/haddock/capri_eval.py capri_eval 1 0 0 100%
biobb_haddock/haddock/capri_eval.py main 12 12 0 0%
biobb_haddock/haddock/capri_eval.py (no function) 17 1 0 94%
biobb_haddock/haddock/clust_fcc.py ClustFCC.__init__ 10 0 0 100%
biobb_haddock/haddock/clust_fcc.py ClustFCC.launch 26 6 0 77%
biobb_haddock/haddock/clust_fcc.py clust_fcc 1 0 0 100%
biobb_haddock/haddock/clust_fcc.py main 11 11 0 0%
biobb_haddock/haddock/clust_fcc.py (no function) 17 1 0 94%
biobb_haddock/haddock/common.py create_cfg 44 4 0 91%
biobb_haddock/haddock/common.py cfg_preset 20 0 0 100%
biobb_haddock/haddock/common.py unzip_workflow_data 9 0 0 100%
biobb_haddock/haddock/common.py (no function) 8 0 0 100%
biobb_haddock/haddock/contact_map.py ContactMap.__init__ 10 0 0 100%
biobb_haddock/haddock/contact_map.py ContactMap.launch 26 6 0 77%
biobb_haddock/haddock/contact_map.py contact_map 1 0 0 100%
biobb_haddock/haddock/contact_map.py main 11 11 0 0%
biobb_haddock/haddock/contact_map.py (no function) 17 1 0 94%
biobb_haddock/haddock/em_ref.py EMRef.__init__ 10 0 0 100%
biobb_haddock/haddock/em_ref.py EMRef.launch 32 9 0 72%
biobb_haddock/haddock/em_ref.py em_ref 1 0 0 100%
biobb_haddock/haddock/em_ref.py main 14 14 0 0%
biobb_haddock/haddock/em_ref.py (no function) 17 1 0 94%
biobb_haddock/haddock/flex_ref.py FlexRef.__init__ 10 0 0 100%
biobb_haddock/haddock/flex_ref.py FlexRef.launch 32 8 0 75%
biobb_haddock/haddock/flex_ref.py flex_ref 1 0 0 100%
biobb_haddock/haddock/flex_ref.py main 14 14 0 0%
biobb_haddock/haddock/flex_ref.py (no function) 17 1 0 94%
biobb_haddock/haddock/folder_test.py FolderTest.__init__ 6 6 0 0%
biobb_haddock/haddock/folder_test.py FolderTest.launch 11 11 0 0%
biobb_haddock/haddock/folder_test.py folder_test 1 1 0 0%
biobb_haddock/haddock/folder_test.py main 8 8 0 0%
biobb_haddock/haddock/folder_test.py (no function) 15 15 0 0%
biobb_haddock/haddock/haddock3_config.py load 4 2 0 50%
biobb_haddock/haddock/haddock3_config.py loads 37 17 0 54%
biobb_haddock/haddock/haddock3_config.py save 2 0 0 100%
biobb_haddock/haddock/haddock3_config.py (no function) 12 0 0 100%
biobb_haddock/haddock/haddock3_extend.py Haddock3Extend.__init__ 5 0 0 100%
biobb_haddock/haddock/haddock3_extend.py Haddock3Extend.launch 21 4 0 81%
biobb_haddock/haddock/haddock3_extend.py haddock3_extend 1 0 0 100%
biobb_haddock/haddock/haddock3_extend.py main 10 10 0 0%
biobb_haddock/haddock/haddock3_extend.py (no function) 19 1 0 95%
biobb_haddock/haddock/haddock3_run.py Haddock3Run.__init__ 7 0 0 100%
biobb_haddock/haddock/haddock3_run.py Haddock3Run.launch 24 6 0 75%
biobb_haddock/haddock/haddock3_run.py haddock3_run 1 0 0 100%
biobb_haddock/haddock/haddock3_run.py main 14 14 0 0%
biobb_haddock/haddock/haddock3_run.py (no function) 18 1 0 94%
biobb_haddock/haddock/rigid_body.py RigidBody.__init__ 10 0 0 100%
biobb_haddock/haddock/rigid_body.py RigidBody.launch 32 9 0 72%
biobb_haddock/haddock/rigid_body.py rigid_body 1 0 0 100%
biobb_haddock/haddock/rigid_body.py main 14 14 0 0%
biobb_haddock/haddock/rigid_body.py (no function) 18 1 0 94%
biobb_haddock/haddock/sele_top.py SeleTop.__init__ 10 0 0 100%
biobb_haddock/haddock/sele_top.py SeleTop.launch 32 6 0 81%
biobb_haddock/haddock/sele_top.py sele_top 1 0 0 100%
biobb_haddock/haddock/sele_top.py main 11 11 0 0%
biobb_haddock/haddock/sele_top.py (no function) 18 1 0 94%
biobb_haddock/haddock/sele_top_clusts.py SeleTopClusts.__init__ 10 0 0 100%
biobb_haddock/haddock/sele_top_clusts.py SeleTopClusts.launch 26 6 0 77%
biobb_haddock/haddock/sele_top_clusts.py sele_top_clusts 1 0 0 100%
biobb_haddock/haddock/sele_top_clusts.py main 11 11 0 0%
biobb_haddock/haddock/sele_top_clusts.py (no function) 17 1 0 94%
biobb_haddock/haddock/topology.py Topology.__init__ 9 0 0 100%
biobb_haddock/haddock/topology.py Topology.launch 29 4 0 86%
biobb_haddock/haddock/topology.py topology 1 0 0 100%
biobb_haddock/haddock/topology.py main 13 13 0 0%
biobb_haddock/haddock/topology.py (no function) 17 1 0 94%
biobb_haddock/haddock_restraints/__init__.py (no function) 2 0 0 100%
biobb_haddock/haddock_restraints/haddock3_accessibility.py Haddock3Accessibility.__init__ 9 0 0 100%
biobb_haddock/haddock_restraints/haddock3_accessibility.py Haddock3Accessibility.launch 33 7 0 79%
biobb_haddock/haddock_restraints/haddock3_accessibility.py haddock3_accessibility 1 0 0 100%
biobb_haddock/haddock_restraints/haddock3_accessibility.py main 10 10 0 0%
biobb_haddock/haddock_restraints/haddock3_accessibility.py (no function) 17 1 0 94%
biobb_haddock/haddock_restraints/haddock3_actpass_to_ambig.py Haddock3ActpassToAmbig.__init__ 8 0 0 100%
biobb_haddock/haddock_restraints/haddock3_actpass_to_ambig.py Haddock3ActpassToAmbig.launch 28 11 0 61%
biobb_haddock/haddock_restraints/haddock3_actpass_to_ambig.py haddock3_actpass_to_ambig 1 0 0 100%
biobb_haddock/haddock_restraints/haddock3_actpass_to_ambig.py main 10 10 0 0%
biobb_haddock/haddock_restraints/haddock3_actpass_to_ambig.py (no function) 14 1 0 93%
biobb_haddock/haddock_restraints/haddock3_passive_from_active.py Haddock3PassiveFromActive.__init__ 16 4 0 75%
biobb_haddock/haddock_restraints/haddock3_passive_from_active.py Haddock3PassiveFromActive.launch 24 4 0 83%
biobb_haddock/haddock_restraints/haddock3_passive_from_active.py haddock3_passive_from_active 1 0 0 100%
biobb_haddock/haddock_restraints/haddock3_passive_from_active.py main 10 10 0 0%
biobb_haddock/haddock_restraints/haddock3_passive_from_active.py (no function) 15 1 0 93%
biobb_haddock/haddock_restraints/haddock3_restrain_bodies.py Haddock3RestrainBodies.__init__ 7 0 0 100%
biobb_haddock/haddock_restraints/haddock3_restrain_bodies.py Haddock3RestrainBodies.launch 21 5 0 76%
biobb_haddock/haddock_restraints/haddock3_restrain_bodies.py haddock3_restrain_bodies 1 0 0 100%
biobb_haddock/haddock_restraints/haddock3_restrain_bodies.py main 9 9 0 0%
biobb_haddock/haddock_restraints/haddock3_restrain_bodies.py (no function) 14 1 0 93%
biobb_haddock/test/__init__.py (no function) 0 0 0 100%
biobb_haddock/test/unitests/test_haddock/test_capri_eval.py TestCapriEval.setup_class 1 0 0 100%
biobb_haddock/test/unitests/test_haddock/test_capri_eval.py TestCapriEval.teardown_class 1 0 0 100%
biobb_haddock/test/unitests/test_haddock/test_capri_eval.py TestCapriEval.test_capri_eval 4 0 0 100%
biobb_haddock/test/unitests/test_haddock/test_capri_eval.py (no function) 7 0 0 100%
biobb_haddock/test/unitests/test_haddock/test_clust_fcc.py TestClustFCC.setup_class 1 0 0 100%
biobb_haddock/test/unitests/test_haddock/test_clust_fcc.py TestClustFCC.teardown_class 1 0 0 100%
biobb_haddock/test/unitests/test_haddock/test_clust_fcc.py TestClustFCC.test_clust_fcc 4 0 0 100%
biobb_haddock/test/unitests/test_haddock/test_clust_fcc.py (no function) 7 0 0 100%
biobb_haddock/test/unitests/test_haddock/test_common.py TestCreateCfg.setup_class 1 0 0 100%
biobb_haddock/test/unitests/test_haddock/test_common.py TestCreateCfg.teardown_class 1 0 0 100%
biobb_haddock/test/unitests/test_haddock/test_common.py TestCreateCfg.test_create_cfg_step 8 0 0 100%
biobb_haddock/test/unitests/test_haddock/test_common.py TestCreateCfg.test_create_cfg_run 8 0 0 100%
biobb_haddock/test/unitests/test_haddock/test_common.py (no function) 8 0 0 100%
biobb_haddock/test/unitests/test_haddock/test_contact_map.py TestContactMap.setup_class 1 0 0 100%
biobb_haddock/test/unitests/test_haddock/test_contact_map.py TestContactMap.teardown_class 1 0 0 100%
biobb_haddock/test/unitests/test_haddock/test_contact_map.py TestContactMap.test_contact_map 4 0 0 100%
biobb_haddock/test/unitests/test_haddock/test_contact_map.py (no function) 7 0 0 100%
biobb_haddock/test/unitests/test_haddock/test_em_ref.py TestEMRef.setup_class 1 0 0 100%
biobb_haddock/test/unitests/test_haddock/test_em_ref.py TestEMRef.teardown_class 1 0 0 100%
biobb_haddock/test/unitests/test_haddock/test_em_ref.py TestEMRef.test_em_ref 4 0 0 100%
biobb_haddock/test/unitests/test_haddock/test_em_ref.py (no function) 7 0 0 100%
biobb_haddock/test/unitests/test_haddock/test_flex_ref.py TestFlexRef.setup_class 1 0 0 100%
biobb_haddock/test/unitests/test_haddock/test_flex_ref.py TestFlexRef.teardown_class 1 0 0 100%
biobb_haddock/test/unitests/test_haddock/test_flex_ref.py TestFlexRef.test_flex_ref 4 0 0 100%
biobb_haddock/test/unitests/test_haddock/test_flex_ref.py (no function) 7 0 0 100%
biobb_haddock/test/unitests/test_haddock/test_haddock3_extend.py TestHaddock3Extend.setup_class 1 0 0 100%
biobb_haddock/test/unitests/test_haddock/test_haddock3_extend.py TestHaddock3Extend.teardown_class 1 0 0 100%
biobb_haddock/test/unitests/test_haddock/test_haddock3_extend.py TestHaddock3Extend.test_haddock3_extend 3 0 0 100%
biobb_haddock/test/unitests/test_haddock/test_haddock3_extend.py (no function) 7 0 0 100%
biobb_haddock/test/unitests/test_haddock/test_haddock3_run.py TestHaddock3Run.setup_class 1 0 0 100%
biobb_haddock/test/unitests/test_haddock/test_haddock3_run.py TestHaddock3Run.teardown_class 1 0 0 100%
biobb_haddock/test/unitests/test_haddock/test_haddock3_run.py TestHaddock3Run.test_haddock3_run 3 0 0 100%
biobb_haddock/test/unitests/test_haddock/test_haddock3_run.py (no function) 7 0 0 100%
biobb_haddock/test/unitests/test_haddock/test_rigid_body.py TestRigidBody.setup_class 1 0 0 100%
biobb_haddock/test/unitests/test_haddock/test_rigid_body.py TestRigidBody.teardown_class 1 0 0 100%
biobb_haddock/test/unitests/test_haddock/test_rigid_body.py TestRigidBody.test_rigid_body 4 0 0 100%
biobb_haddock/test/unitests/test_haddock/test_rigid_body.py (no function) 7 0 0 100%
biobb_haddock/test/unitests/test_haddock/test_sele_top.py TestSeleTop.setup_class 1 0 0 100%
biobb_haddock/test/unitests/test_haddock/test_sele_top.py TestSeleTop.teardown_class 1 0 0 100%
biobb_haddock/test/unitests/test_haddock/test_sele_top.py TestSeleTop.test_sele_top 5 0 0 100%
biobb_haddock/test/unitests/test_haddock/test_sele_top.py (no function) 7 0 0 100%
biobb_haddock/test/unitests/test_haddock/test_sele_top_clusts.py TestSeleTopClusts.setup_class 1 0 0 100%
biobb_haddock/test/unitests/test_haddock/test_sele_top_clusts.py TestSeleTopClusts.teardown_class 1 0 0 100%
biobb_haddock/test/unitests/test_haddock/test_sele_top_clusts.py TestSeleTopClusts.test_sele_top_clusts 4 0 0 100%
biobb_haddock/test/unitests/test_haddock/test_sele_top_clusts.py (no function) 7 0 0 100%
biobb_haddock/test/unitests/test_haddock/test_topology.py TestTopology.setup_class 1 0 0 100%
biobb_haddock/test/unitests/test_haddock/test_topology.py TestTopology.teardown_class 1 0 0 100%
biobb_haddock/test/unitests/test_haddock/test_topology.py TestTopology.test_topology 5 0 0 100%
biobb_haddock/test/unitests/test_haddock/test_topology.py (no function) 7 0 0 100%
biobb_haddock/test/unitests/test_haddock_restraints/test_haddock3_accessibility.py TestHaddockAccessibility.setup_class 1 0 0 100%
biobb_haddock/test/unitests/test_haddock_restraints/test_haddock3_accessibility.py TestHaddockAccessibility.teardown_class 1 0 0 100%
biobb_haddock/test/unitests/test_haddock_restraints/test_haddock3_accessibility.py TestHaddockAccessibility.test_capri_eval 4 0 0 100%
biobb_haddock/test/unitests/test_haddock_restraints/test_haddock3_accessibility.py (no function) 6 0 0 100%
biobb_haddock/test/unitests/test_haddock_restraints/test_haddock3_actpass_to_ambig.py TestHaddockActpassToAmbig.setup_class 1 0 0 100%
biobb_haddock/test/unitests/test_haddock_restraints/test_haddock3_actpass_to_ambig.py TestHaddockActpassToAmbig.teardown_class 1 0 0 100%
biobb_haddock/test/unitests/test_haddock_restraints/test_haddock3_actpass_to_ambig.py TestHaddockActpassToAmbig.test_haddock3_actpass_to_ambig 3 0 0 100%
biobb_haddock/test/unitests/test_haddock_restraints/test_haddock3_actpass_to_ambig.py (no function) 6 0 0 100%
biobb_haddock/test/unitests/test_haddock_restraints/test_haddock3_passive_from_active.py TestHaddockPassiveFromActive.setup_class 1 0 0 100%
biobb_haddock/test/unitests/test_haddock_restraints/test_haddock3_passive_from_active.py TestHaddockPassiveFromActive.teardown_class 1 0 0 100%
biobb_haddock/test/unitests/test_haddock_restraints/test_haddock3_passive_from_active.py TestHaddockPassiveFromActive.test_haddock3_passive_from_active 3 0 0 100%
biobb_haddock/test/unitests/test_haddock_restraints/test_haddock3_passive_from_active.py (no function) 6 0 0 100%
biobb_haddock/test/unitests/test_haddock_restraints/test_haddock3_restrain_bodies.py TestHaddockRestrainBodies.setup_class 1 0 0 100%
biobb_haddock/test/unitests/test_haddock_restraints/test_haddock3_restrain_bodies.py TestHaddockRestrainBodies.teardown_class 1 0 0 100%
biobb_haddock/test/unitests/test_haddock_restraints/test_haddock3_restrain_bodies.py TestHaddockRestrainBodies.test_capri_eval 3 0 0 100%
biobb_haddock/test/unitests/test_haddock_restraints/test_haddock3_restrain_bodies.py (no function) 6 0 0 100%
Total   1394 354 0 75%

No items found using the specified filter.