Coverage report:
67%
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Files
Functions
Classes
coverage.py v7.13.0
, created at 2025-12-15 15:57 +0000
File
class
statements
missing
excluded
coverage
biobb_amber / __init__.py
(no class)
4
0
0
100%
biobb_amber / ambpdb / __init__.py
(no class)
3
0
0
100%
biobb_amber / ambpdb / amber_to_pdb.py
AmberToPDB
21
1
0
95%
biobb_amber / ambpdb / amber_to_pdb.py
(no class)
15
1
0
93%
biobb_amber / ambpdb / common.py
(no class)
27
10
0
63%
biobb_amber / cphstats / __init__.py
(no class)
4
0
0
100%
biobb_amber / cphstats / cestats_run.py
CestatsRun
79
23
0
71%
biobb_amber / cphstats / cestats_run.py
(no class)
15
1
0
93%
biobb_amber / cphstats / common.py
(no class)
27
9
0
67%
biobb_amber / cphstats / cphstats_run.py
CphstatsRun
79
23
0
71%
biobb_amber / cphstats / cphstats_run.py
(no class)
15
1
0
93%
biobb_amber / cpptraj / __init__.py
(no class)
3
0
0
100%
biobb_amber / cpptraj / common.py
(no class)
27
10
0
63%
biobb_amber / cpptraj / cpptraj_randomize_ions.py
CpptrajRandomizeIons
40
3
0
92%
biobb_amber / cpptraj / cpptraj_randomize_ions.py
(no class)
17
1
0
94%
biobb_amber / leap / __init__.py
(no class)
6
0
0
100%
biobb_amber / leap / common.py
(no class)
37
20
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46%
biobb_amber / leap / leap_add_ions.py
LeapAddIons
197
88
0
55%
biobb_amber / leap / leap_add_ions.py
(no class)
22
1
0
95%
biobb_amber / leap / leap_build_linear_structure.py
LeapBuildLinearStructure
68
21
0
69%
biobb_amber / leap / leap_build_linear_structure.py
(no class)
19
1
0
95%
biobb_amber / leap / leap_gen_top.py
LeapGenTop
101
41
0
59%
biobb_amber / leap / leap_gen_top.py
(no class)
18
1
0
94%
biobb_amber / leap / leap_solvate.py
LeapSolvate
145
50
0
66%
biobb_amber / leap / leap_solvate.py
(no class)
19
1
0
95%
biobb_amber / parmed / __init__.py
(no class)
4
0
0
100%
biobb_amber / parmed / common.py
(no class)
27
9
0
67%
biobb_amber / parmed / parmed_cpinutil.py
ParmedCpinUtil
40
3
0
92%
biobb_amber / parmed / parmed_cpinutil.py
(no class)
16
1
0
94%
biobb_amber / parmed / parmed_hmassrepartition.py
ParmedHMassRepartition
32
4
0
88%
biobb_amber / parmed / parmed_hmassrepartition.py
(no class)
17
1
0
94%
biobb_amber / pdb4amber / __init__.py
(no class)
3
0
0
100%
biobb_amber / pdb4amber / common.py
(no class)
27
10
0
63%
biobb_amber / pdb4amber / pdb4amber_run.py
Pdb4amberRun
35
5
0
86%
biobb_amber / pdb4amber / pdb4amber_run.py
(no class)
16
1
0
94%
biobb_amber / pmemd / __init__.py
(no class)
3
0
0
100%
biobb_amber / pmemd / common.py
(no class)
27
22
0
19%
biobb_amber / pmemd / pmemd_mdrun.py
PmemdMDRun
161
161
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0%
biobb_amber / pmemd / pmemd_mdrun.py
(no class)
19
2
0
89%
biobb_amber / process / __init__.py
(no class)
4
0
0
100%
biobb_amber / process / common.py
(no class)
37
15
0
59%
biobb_amber / process / process_mdout.py
ProcessMDOut
53
7
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87%
biobb_amber / process / process_mdout.py
(no class)
18
1
0
94%
biobb_amber / process / process_minout.py
ProcessMinOut
53
26
0
51%
biobb_amber / process / process_minout.py
(no class)
18
1
0
94%
biobb_amber / sander / __init__.py
(no class)
3
0
0
100%
biobb_amber / sander / common.py
(no class)
28
9
0
68%
biobb_amber / sander / sander_mdrun.py
SanderMDRun
171
86
0
50%
biobb_amber / sander / sander_mdrun.py
(no class)
20
1
0
95%
biobb_amber / test / unitests / test_ambpdb / test_ambpdb_amber_to_pdb.py
TestAmberToPDB
6
0
0
100%
biobb_amber / test / unitests / test_ambpdb / test_ambpdb_amber_to_pdb.py
(no class)
6
0
0
100%
biobb_amber / test / unitests / test_cphstats / test_cestats_run.py
TestCestatsRun
6
0
0
100%
biobb_amber / test / unitests / test_cphstats / test_cestats_run.py
(no class)
6
0
0
100%
biobb_amber / test / unitests / test_cphstats / test_cphstats_run.py
TestCphstatsRun
6
0
0
100%
biobb_amber / test / unitests / test_cphstats / test_cphstats_run.py
(no class)
6
0
0
100%
biobb_amber / test / unitests / test_cpptraj / test_cpptraj_randomize_ions.py
TestCpptrajRandomizeIons
6
0
0
100%
biobb_amber / test / unitests / test_cpptraj / test_cpptraj_randomize_ions.py
(no class)
6
0
0
100%
biobb_amber / test / unitests / test_leap / test_leap_add_ions.py
TestLeapAddIons
7
0
0
100%
biobb_amber / test / unitests / test_leap / test_leap_add_ions.py
(no class)
6
0
0
100%
biobb_amber / test / unitests / test_leap / test_leap_build_linear_structure.py
TestLeapBuildLinearStructure
6
0
0
100%
biobb_amber / test / unitests / test_leap / test_leap_build_linear_structure.py
(no class)
6
0
0
100%
biobb_amber / test / unitests / test_leap / test_leap_gen_top.py
TestLeapGenTop
10
0
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100%
biobb_amber / test / unitests / test_leap / test_leap_gen_top.py
(no class)
6
0
0
100%
biobb_amber / test / unitests / test_leap / test_leap_solvate.py
TestLeapSolvate
9
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100%
biobb_amber / test / unitests / test_leap / test_leap_solvate.py
(no class)
6
0
0
100%
biobb_amber / test / unitests / test_parmed / test_parmed_cpinutil.py
TestParmedCpinUtil
6
0
0
100%
biobb_amber / test / unitests / test_parmed / test_parmed_cpinutil.py
(no class)
6
0
0
100%
biobb_amber / test / unitests / test_parmed / test_parmed_hmassrepartition.py
TestParmedHMassRepartition
6
0
0
100%
biobb_amber / test / unitests / test_parmed / test_parmed_hmassrepartition.py
(no class)
6
0
0
100%
biobb_amber / test / unitests / test_pdb4amber / test_pdb4amber_pdb4amber.py
TestPdb4amberRun
6
0
0
100%
biobb_amber / test / unitests / test_pdb4amber / test_pdb4amber_pdb4amber.py
(no class)
6
0
0
100%
biobb_amber / test / unitests / test_process / test_process_mdout.py
TestProcessMDOut
6
0
0
100%
biobb_amber / test / unitests / test_process / test_process_mdout.py
(no class)
6
0
0
100%
biobb_amber / test / unitests / test_process / test_process_minout.py
TestProcessMinOut
6
0
0
100%
biobb_amber / test / unitests / test_process / test_process_minout.py
(no class)
6
0
0
100%
biobb_amber / test / unitests / test_sander / test_sander_mdrun.py
TestSanderMDRun
6
0
0
100%
biobb_amber / test / unitests / test_sander / test_sander_mdrun.py
TestSanderMDRunDirectMDin
6
0
0
100%
biobb_amber / test / unitests / test_sander / test_sander_mdrun.py
(no class)
10
0
0
100%
Total
2026
672
0
67%
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