Coverage report: 23%

Files Functions Classes

coverage.py v7.15.2, created at 2026-07-21 13:02 +0000

File class   statements missing excluded   coverage
biobb_amber/__init__.py (no class)   4 0 0   100%
biobb_amber/ambpdb/__init__.py (no class)   3 0 0   100%
biobb_amber/ambpdb/amber_to_pdb.py AmberToPDB   21 21 0   0%
biobb_amber/ambpdb/amber_to_pdb.py (no class)   15 2 0   87%
biobb_amber/ambpdb/common.py (no class)   27 22 0   19%
biobb_amber/cphstats/__init__.py (no class)   4 0 0   100%
biobb_amber/cphstats/cestats_run.py CestatsRun   79 79 0   0%
biobb_amber/cphstats/cestats_run.py (no class)   15 2 0   87%
biobb_amber/cphstats/common.py (no class)   27 22 0   19%
biobb_amber/cphstats/cphstats_run.py CphstatsRun   79 79 0   0%
biobb_amber/cphstats/cphstats_run.py (no class)   15 2 0   87%
biobb_amber/cpptraj/__init__.py (no class)   3 0 0   100%
biobb_amber/cpptraj/common.py (no class)   27 22 0   19%
biobb_amber/cpptraj/cpptraj_randomize_ions.py CpptrajRandomizeIons   42 42 0   0%
biobb_amber/cpptraj/cpptraj_randomize_ions.py (no class)   17 2 0   88%
biobb_amber/leap/__init__.py (no class)   6 0 0   100%
biobb_amber/leap/common.py (no class)   37 27 0   27%
biobb_amber/leap/leap_add_ions.py LeapAddIons   205 205 0   0%
biobb_amber/leap/leap_add_ions.py (no class)   22 2 0   91%
biobb_amber/leap/leap_build_linear_structure.py LeapBuildLinearStructure   72 72 0   0%
biobb_amber/leap/leap_build_linear_structure.py (no class)   19 2 0   89%
biobb_amber/leap/leap_gen_top.py LeapGenTop   105 105 0   0%
biobb_amber/leap/leap_gen_top.py (no class)   18 2 0   89%
biobb_amber/leap/leap_solvate.py LeapSolvate   149 52 0   65%
biobb_amber/leap/leap_solvate.py (no class)   19 1 0   95%
biobb_amber/parmed/__init__.py (no class)   4 0 0   100%
biobb_amber/parmed/common.py (no class)   27 22 0   19%
biobb_amber/parmed/parmed_cpinutil.py ParmedCpinUtil   40 40 0   0%
biobb_amber/parmed/parmed_cpinutil.py (no class)   16 2 0   88%
biobb_amber/parmed/parmed_hmassrepartition.py ParmedHMassRepartition   32 32 0   0%
biobb_amber/parmed/parmed_hmassrepartition.py (no class)   17 2 0   88%
biobb_amber/pdb4amber/__init__.py (no class)   3 0 0   100%
biobb_amber/pdb4amber/common.py (no class)   27 22 0   19%
biobb_amber/pdb4amber/pdb4amber_run.py Pdb4amberRun   36 36 0   0%
biobb_amber/pdb4amber/pdb4amber_run.py (no class)   16 2 0   88%
biobb_amber/pmemd/__init__.py (no class)   3 0 0   100%
biobb_amber/pmemd/common.py (no class)   27 22 0   19%
biobb_amber/pmemd/pmemd_mdrun.py PmemdMDRun   161 161 0   0%
biobb_amber/pmemd/pmemd_mdrun.py (no class)   19 2 0   89%
biobb_amber/process/__init__.py (no class)   4 0 0   100%
biobb_amber/process/common.py (no class)   37 30 0   19%
biobb_amber/process/process_mdout.py ProcessMDOut   57 57 0   0%
biobb_amber/process/process_mdout.py (no class)   18 2 0   89%
biobb_amber/process/process_minout.py ProcessMinOut   57 57 0   0%
biobb_amber/process/process_minout.py (no class)   18 2 0   89%
biobb_amber/sander/__init__.py (no class)   3 0 0   100%
biobb_amber/sander/common.py (no class)   28 23 0   18%
biobb_amber/sander/sander_mdrun.py SanderMDRun   171 171 0   0%
biobb_amber/sander/sander_mdrun.py (no class)   20 2 0   90%
biobb_amber/test/unitests/test_leap/test_leap_solvate.py TestLeapSolvate   7 0 0   100%
biobb_amber/test/unitests/test_leap/test_leap_solvate.py (no class)   6 0 0   100%
Total     1884 1450 0   23%

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