Coverage report: 67%

Files Functions Classes

coverage.py v7.13.0, created at 2025-12-15 15:57 +0000

File   statements missing excluded   coverage
biobb_amber / __init__.py   4 0 0   100%
biobb_amber / ambpdb / __init__.py   3 0 0   100%
biobb_amber / ambpdb / amber_to_pdb.py   36 2 0   94%
biobb_amber / ambpdb / common.py   27 10 0   63%
biobb_amber / cphstats / __init__.py   4 0 0   100%
biobb_amber / cphstats / cestats_run.py   94 24 0   74%
biobb_amber / cphstats / common.py   27 9 0   67%
biobb_amber / cphstats / cphstats_run.py   94 24 0   74%
biobb_amber / cpptraj / __init__.py   3 0 0   100%
biobb_amber / cpptraj / common.py   27 10 0   63%
biobb_amber / cpptraj / cpptraj_randomize_ions.py   57 4 0   93%
biobb_amber / leap / __init__.py   6 0 0   100%
biobb_amber / leap / common.py   37 20 0   46%
biobb_amber / leap / leap_add_ions.py   219 89 0   59%
biobb_amber / leap / leap_build_linear_structure.py   87 22 0   75%
biobb_amber / leap / leap_gen_top.py   119 42 0   65%
biobb_amber / leap / leap_solvate.py   164 51 0   69%
biobb_amber / parmed / __init__.py   4 0 0   100%
biobb_amber / parmed / common.py   27 9 0   67%
biobb_amber / parmed / parmed_cpinutil.py   56 4 0   93%
biobb_amber / parmed / parmed_hmassrepartition.py   49 5 0   90%
biobb_amber / pdb4amber / __init__.py   3 0 0   100%
biobb_amber / pdb4amber / common.py   27 10 0   63%
biobb_amber / pdb4amber / pdb4amber_run.py   51 6 0   88%
biobb_amber / pmemd / __init__.py   3 0 0   100%
biobb_amber / pmemd / common.py   27 22 0   19%
biobb_amber / pmemd / pmemd_mdrun.py   180 163 0   9%
biobb_amber / process / __init__.py   4 0 0   100%
biobb_amber / process / common.py   37 15 0   59%
biobb_amber / process / process_mdout.py   71 8 0   89%
biobb_amber / process / process_minout.py   71 27 0   62%
biobb_amber / sander / __init__.py   3 0 0   100%
biobb_amber / sander / common.py   28 9 0   68%
biobb_amber / sander / sander_mdrun.py   191 87 0   54%
biobb_amber / test / unitests / test_ambpdb / test_ambpdb_amber_to_pdb.py   12 0 0   100%
biobb_amber / test / unitests / test_cphstats / test_cestats_run.py   12 0 0   100%
biobb_amber / test / unitests / test_cphstats / test_cphstats_run.py   12 0 0   100%
biobb_amber / test / unitests / test_cpptraj / test_cpptraj_randomize_ions.py   12 0 0   100%
biobb_amber / test / unitests / test_leap / test_leap_add_ions.py   13 0 0   100%
biobb_amber / test / unitests / test_leap / test_leap_build_linear_structure.py   12 0 0   100%
biobb_amber / test / unitests / test_leap / test_leap_gen_top.py   16 0 0   100%
biobb_amber / test / unitests / test_leap / test_leap_solvate.py   15 0 0   100%
biobb_amber / test / unitests / test_parmed / test_parmed_cpinutil.py   12 0 0   100%
biobb_amber / test / unitests / test_parmed / test_parmed_hmassrepartition.py   12 0 0   100%
biobb_amber / test / unitests / test_pdb4amber / test_pdb4amber_pdb4amber.py   12 0 0   100%
biobb_amber / test / unitests / test_process / test_process_mdout.py   12 0 0   100%
biobb_amber / test / unitests / test_process / test_process_minout.py   12 0 0   100%
biobb_amber / test / unitests / test_sander / test_sander_mdrun.py   22 0 0   100%
Total   2026 672 0   67%

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