Coverage report: 66%

Files Functions Classes

coverage.py v7.14.1, created at 2026-05-28 09:46 +0000

File   statements missing excluded   coverage
biobb_amber/__init__.py   4 0 0   100%
biobb_amber/ambpdb/__init__.py   3 0 0   100%
biobb_amber/ambpdb/amber_to_pdb.py   36 2 0   94%
biobb_amber/ambpdb/common.py   27 10 0   63%
biobb_amber/cphstats/__init__.py   4 0 0   100%
biobb_amber/cphstats/cestats_run.py   94 24 0   74%
biobb_amber/cphstats/common.py   27 9 0   67%
biobb_amber/cphstats/cphstats_run.py   94 24 0   74%
biobb_amber/cpptraj/__init__.py   3 0 0   100%
biobb_amber/cpptraj/common.py   27 10 0   63%
biobb_amber/cpptraj/cpptraj_randomize_ions.py   59 5 0   92%
biobb_amber/leap/__init__.py   6 0 0   100%
biobb_amber/leap/common.py   37 20 0   46%
biobb_amber/leap/leap_add_ions.py   227 94 0   59%
biobb_amber/leap/leap_build_linear_structure.py   91 24 0   74%
biobb_amber/leap/leap_gen_top.py   123 44 0   64%
biobb_amber/leap/leap_solvate.py   168 53 0   68%
biobb_amber/parmed/__init__.py   4 0 0   100%
biobb_amber/parmed/common.py   27 9 0   67%
biobb_amber/parmed/parmed_cpinutil.py   56 4 0   93%
biobb_amber/parmed/parmed_hmassrepartition.py   49 5 0   90%
biobb_amber/pdb4amber/__init__.py   3 0 0   100%
biobb_amber/pdb4amber/common.py   27 10 0   63%
biobb_amber/pdb4amber/pdb4amber_run.py   52 6 0   88%
biobb_amber/pmemd/__init__.py   3 0 0   100%
biobb_amber/pmemd/common.py   27 22 0   19%
biobb_amber/pmemd/pmemd_mdrun.py   180 163 0   9%
biobb_amber/process/__init__.py   4 0 0   100%
biobb_amber/process/common.py   37 15 0   59%
biobb_amber/process/process_mdout.py   75 11 0   85%
biobb_amber/process/process_minout.py   75 30 0   60%
biobb_amber/sander/__init__.py   3 0 0   100%
biobb_amber/sander/common.py   28 9 0   68%
biobb_amber/sander/sander_mdrun.py   191 87 0   54%
biobb_amber/test/unitests/test_ambpdb/test_ambpdb_amber_to_pdb.py   12 0 0   100%
biobb_amber/test/unitests/test_cphstats/test_cestats_run.py   12 0 0   100%
biobb_amber/test/unitests/test_cphstats/test_cphstats_run.py   12 0 0   100%
biobb_amber/test/unitests/test_cpptraj/test_cpptraj_randomize_ions.py   12 0 0   100%
biobb_amber/test/unitests/test_leap/test_leap_add_ions.py   13 0 0   100%
biobb_amber/test/unitests/test_leap/test_leap_build_linear_structure.py   12 0 0   100%
biobb_amber/test/unitests/test_leap/test_leap_gen_top.py   16 0 0   100%
biobb_amber/test/unitests/test_leap/test_leap_solvate.py   15 0 0   100%
biobb_amber/test/unitests/test_parmed/test_parmed_cpinutil.py   12 0 0   100%
biobb_amber/test/unitests/test_parmed/test_parmed_hmassrepartition.py   12 0 0   100%
biobb_amber/test/unitests/test_pdb4amber/test_pdb4amber_pdb4amber.py   12 0 0   100%
biobb_amber/test/unitests/test_process/test_process_mdout.py   12 0 0   100%
biobb_amber/test/unitests/test_process/test_process_minout.py   12 0 0   100%
biobb_amber/test/unitests/test_sander/test_sander_mdrun.py   22 0 0   100%
Total   2057 690 0   66%

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