Coverage report: 75%

Files Functions Classes

coverage.py v7.6.10, created at 2025-01-08 13:27 +0000

File function statements missing excluded coverage
biobb_pytorch/__init__.py (no function) 4 0 0 100%
biobb_pytorch/mdae/__init__.py (no function) 3 0 0 100%
biobb_pytorch/mdae/apply_mdae.py ApplyMDAE.__init__ 21 0 0 100%
biobb_pytorch/mdae/apply_mdae.py ApplyMDAE.launch 18 1 0 94%
biobb_pytorch/mdae/apply_mdae.py ApplyMDAE.apply_model 15 0 0 100%
biobb_pytorch/mdae/apply_mdae.py applyMDAE 1 0 0 100%
biobb_pytorch/mdae/apply_mdae.py main 12 12 0 0%
biobb_pytorch/mdae/apply_mdae.py (no function) 21 1 0 95%
biobb_pytorch/mdae/common.py ndarray_normalization 1 0 0 100%
biobb_pytorch/mdae/common.py ndarray_denormalization 1 0 0 100%
biobb_pytorch/mdae/common.py get_loss_function 5 0 0 100%
biobb_pytorch/mdae/common.py get_optimizer_function 5 0 0 100%
biobb_pytorch/mdae/common.py execute_model 17 0 0 100%
biobb_pytorch/mdae/common.py format_time 7 2 0 71%
biobb_pytorch/mdae/common.py human_readable_file_size 8 1 0 88%
biobb_pytorch/mdae/common.py (no function) 11 0 0 100%
biobb_pytorch/mdae/mdae.py MDAE.__init__ 26 0 0 100%
biobb_pytorch/mdae/mdae.py MDAE.forward 5 0 0 100%
biobb_pytorch/mdae/mdae.py (no function) 4 0 0 100%
biobb_pytorch/mdae/plots.py plot_loss 14 14 0 0%
biobb_pytorch/mdae/plots.py _numpy_rmsd 1 1 0 0%
biobb_pytorch/mdae/plots.py plot_rmsd 13 13 0 0%
biobb_pytorch/mdae/plots.py plot_latent_space 16 16 0 0%
biobb_pytorch/mdae/plots.py _numpy_rmsf_by_atom 1 1 0 0%
biobb_pytorch/mdae/plots.py plot_rmsf 13 13 0 0%
biobb_pytorch/mdae/plots.py plot_rmsf_difference 13 13 0 0%
biobb_pytorch/mdae/plots.py (no function) 11 11 0 0%
biobb_pytorch/mdae/train_mdae.py TrainMDAE.__init__ 59 4 0 93%
biobb_pytorch/mdae/train_mdae.py TrainMDAE.launch 23 1 0 96%
biobb_pytorch/mdae/train_mdae.py TrainMDAE.train_model 46 0 0 100%
biobb_pytorch/mdae/train_mdae.py TrainMDAE.training_step 19 0 0 100%
biobb_pytorch/mdae/train_mdae.py TrainMDAE.evaluate_model 1 0 0 100%
biobb_pytorch/mdae/train_mdae.py trainMDAE 1 0 0 100%
biobb_pytorch/mdae/train_mdae.py main 13 13 0 0%
biobb_pytorch/mdae/train_mdae.py (no function) 26 1 0 96%
biobb_pytorch/test/__init__.py (no function) 0 0 0 100%
biobb_pytorch/test/unitests/test_mdae/test_apply_mdae.py TestApplyMdae.setup_class 1 0 0 100%
biobb_pytorch/test/unitests/test_mdae/test_apply_mdae.py TestApplyMdae.teardown_class 1 0 0 100%
biobb_pytorch/test/unitests/test_mdae/test_apply_mdae.py TestApplyMdae.test_apply_mdae 3 0 0 100%
biobb_pytorch/test/unitests/test_mdae/test_apply_mdae.py (no function) 6 0 0 100%
biobb_pytorch/test/unitests/test_mdae/test_train_mdae.py TestTrainMdae.setup_class 1 0 0 100%
biobb_pytorch/test/unitests/test_mdae/test_train_mdae.py TestTrainMdae.teardown_class 1 0 0 100%
biobb_pytorch/test/unitests/test_mdae/test_train_mdae.py TestTrainMdae.test_train_mdae 4 0 0 100%
biobb_pytorch/test/unitests/test_mdae/test_train_mdae.py (no function) 6 0 0 100%
Total   478 118 0 75%

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