Coverage report:
81%
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Functions
Classes
coverage.py v7.5.3
, created at 2024-06-14 19:03 +0000
File
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coverage
biobb_structure_utils/__init__.py
3
0
0
100%
biobb_structure_utils/gro_lib/__init__.py
0
0
0
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biobb_structure_utils/gro_lib/gro.py
210
59
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72%
biobb_structure_utils/test/__init__.py
0
0
0
100%
biobb_structure_utils/test/unitests/test_utils/test_cat_pdb.py
12
0
0
100%
biobb_structure_utils/test/unitests/test_utils/test_closest_residues.py
12
0
0
100%
biobb_structure_utils/test/unitests/test_utils/test_extract_atoms_gro.py
12
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100%
biobb_structure_utils/test/unitests/test_utils/test_extract_atoms_pdb.py
12
0
0
100%
biobb_structure_utils/test/unitests/test_utils/test_extract_chain.py
12
0
0
100%
biobb_structure_utils/test/unitests/test_utils/test_extract_heteroatom.py
12
0
0
100%
biobb_structure_utils/test/unitests/test_utils/test_extract_model.py
11
0
0
100%
biobb_structure_utils/test/unitests/test_utils/test_extract_molecule.py
12
0
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100%
biobb_structure_utils/test/unitests/test_utils/test_extract_residues.py
12
0
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100%
biobb_structure_utils/test/unitests/test_utils/test_remove_ligand_gro.py
12
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biobb_structure_utils/test/unitests/test_utils/test_remove_ligand_pdb.py
12
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biobb_structure_utils/test/unitests/test_utils/test_remove_molecules.py
12
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biobb_structure_utils/test/unitests/test_utils/test_remove_pdb_water.py
12
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biobb_structure_utils/test/unitests/test_utils/test_renumber_structure_2vgb.py
14
0
0
100%
biobb_structure_utils/test/unitests/test_utils/test_renumber_structure_gro.py
14
0
0
100%
biobb_structure_utils/test/unitests/test_utils/test_renumber_structure_pdb.py
14
0
0
100%
biobb_structure_utils/test/unitests/test_utils/test_renumber_structure_smallgro.py
14
0
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100%
biobb_structure_utils/test/unitests/test_utils/test_sort_gro_residues.py
12
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0
100%
biobb_structure_utils/test/unitests/test_utils/test_str_check_add_hydrogens.py
12
0
0
100%
biobb_structure_utils/test/unitests/test_utils/test_structure_check.py
11
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0
100%
biobb_structure_utils/utils/__init__.py
2
0
0
100%
biobb_structure_utils/utils/cat_pdb.py
58
12
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79%
biobb_structure_utils/utils/closest_residues.py
84
17
0
80%
biobb_structure_utils/utils/common.py
134
24
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82%
biobb_structure_utils/utils/extract_atoms.py
67
14
0
79%
biobb_structure_utils/utils/extract_chain.py
66
18
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73%
biobb_structure_utils/utils/extract_heteroatoms.py
68
17
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75%
biobb_structure_utils/utils/extract_model.py
72
17
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76%
biobb_structure_utils/utils/extract_molecule.py
59
14
0
76%
biobb_structure_utils/utils/extract_residues.py
63
14
0
78%
biobb_structure_utils/utils/remove_ligand.py
54
11
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80%
biobb_structure_utils/utils/remove_molecules.py
66
14
0
79%
biobb_structure_utils/utils/remove_pdb_water.py
39
11
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72%
biobb_structure_utils/utils/renumber_structure.py
87
12
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86%
biobb_structure_utils/utils/sort_gro_residues.py
43
11
0
74%
biobb_structure_utils/utils/str_check_add_hydrogens.py
63
14
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78%
biobb_structure_utils/utils/structure_check.py
56
13
0
77%
Total
1540
292
0
81%
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