Coverage report: 89%

Files Functions Classes

coverage.py v7.14.1, created at 2026-05-29 07:52 +0000

File   statements missing excluded   coverage
biobb_structure_utils/__init__.py   4 0 0   100%
biobb_structure_utils/gro_lib/__init__.py   0 0 0   100%
biobb_structure_utils/gro_lib/gro.py   210 59 0   72%
biobb_structure_utils/test/__init__.py   0 0 0   100%
biobb_structure_utils/test/unitests/test_utils/test_cat_pdb.py   12 0 0   100%
biobb_structure_utils/test/unitests/test_utils/test_closest_residues.py   12 0 0   100%
biobb_structure_utils/test/unitests/test_utils/test_extract_atoms_gro.py   12 0 0   100%
biobb_structure_utils/test/unitests/test_utils/test_extract_atoms_pdb.py   12 0 0   100%
biobb_structure_utils/test/unitests/test_utils/test_extract_chain.py   12 0 0   100%
biobb_structure_utils/test/unitests/test_utils/test_extract_heteroatom.py   12 0 0   100%
biobb_structure_utils/test/unitests/test_utils/test_extract_model.py   11 0 0   100%
biobb_structure_utils/test/unitests/test_utils/test_extract_molecule.py   12 0 0   100%
biobb_structure_utils/test/unitests/test_utils/test_extract_residues.py   12 0 0   100%
biobb_structure_utils/test/unitests/test_utils/test_remove_ligand_gro.py   12 0 0   100%
biobb_structure_utils/test/unitests/test_utils/test_remove_ligand_pdb.py   12 0 0   100%
biobb_structure_utils/test/unitests/test_utils/test_remove_molecules.py   12 0 0   100%
biobb_structure_utils/test/unitests/test_utils/test_remove_pdb_water.py   12 0 0   100%
biobb_structure_utils/test/unitests/test_utils/test_renumber_structure_2vgb.py   14 0 0   100%
biobb_structure_utils/test/unitests/test_utils/test_renumber_structure_gro.py   14 0 0   100%
biobb_structure_utils/test/unitests/test_utils/test_renumber_structure_pdb.py   14 0 0   100%
biobb_structure_utils/test/unitests/test_utils/test_renumber_structure_smallgro.py   14 0 0   100%
biobb_structure_utils/test/unitests/test_utils/test_sort_gro_residues.py   12 0 0   100%
biobb_structure_utils/test/unitests/test_utils/test_str_check_add_hydrogens.py   11 0 0   100%
biobb_structure_utils/test/unitests/test_utils/test_structure_check.py   11 0 0   100%
biobb_structure_utils/utils/__init__.py   3 0 0   100%
biobb_structure_utils/utils/cat_pdb.py   47 2 0   96%
biobb_structure_utils/utils/closest_residues.py   74 8 0   89%
biobb_structure_utils/utils/common.py   144 29 0   80%
biobb_structure_utils/utils/extract_atoms.py   57 5 0   91%
biobb_structure_utils/utils/extract_chain.py   56 9 0   84%
biobb_structure_utils/utils/extract_heteroatoms.py   58 8 0   86%
biobb_structure_utils/utils/extract_model.py   63 8 0   87%
biobb_structure_utils/utils/extract_molecule.py   50 5 0   90%
biobb_structure_utils/utils/extract_residues.py   53 5 0   91%
biobb_structure_utils/utils/remove_ligand.py   44 2 0   95%
biobb_structure_utils/utils/remove_molecules.py   56 5 0   91%
biobb_structure_utils/utils/remove_pdb_water.py   29 2 0   93%
biobb_structure_utils/utils/renumber_structure.py   76 2 0   97%
biobb_structure_utils/utils/sort_gro_residues.py   34 2 0   94%
biobb_structure_utils/utils/str_check_add_hydrogens.py   53 5 0   91%
biobb_structure_utils/utils/structure_check.py   47 4 0   91%
Total   1403 160 0   89%

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