Coverage report: 61%

Files Functions Classes

coverage.py v7.15.3, created at 2026-08-07 12:30 +0000

File class   statements missing excluded   coverage
biobb_analysis/__init__.py (no class)   4 0 0   100%
biobb_analysis/ambertools/__init__.py (no class)   15 0 0   100%
biobb_analysis/ambertools/common.py (no class)   274 101 0   63%
biobb_analysis/ambertools/cpptraj_average.py CpptrajAverage   49 3 0   94%
biobb_analysis/ambertools/cpptraj_average.py (no class)   17 1 0   94%
biobb_analysis/ambertools/cpptraj_bfactor.py CpptrajBfactor   54 3 0   94%
biobb_analysis/ambertools/cpptraj_bfactor.py (no class)   17 1 0   94%
biobb_analysis/ambertools/cpptraj_cluster.py CpptrajCluster   75 4 0   95%
biobb_analysis/ambertools/cpptraj_cluster.py (no class)   17 1 0   94%
biobb_analysis/ambertools/cpptraj_convert.py CpptrajConvert   48 3 0   94%
biobb_analysis/ambertools/cpptraj_convert.py (no class)   17 1 0   94%
biobb_analysis/ambertools/cpptraj_dry.py CpptrajDry   52 3 0   94%
biobb_analysis/ambertools/cpptraj_dry.py (no class)   17 1 0   94%
biobb_analysis/ambertools/cpptraj_image.py CpptrajImage   52 3 0   94%
biobb_analysis/ambertools/cpptraj_image.py (no class)   17 1 0   94%
biobb_analysis/ambertools/cpptraj_input.py CpptrajInput   28 1 0   96%
biobb_analysis/ambertools/cpptraj_input.py (no class)   16 2 0   88%
biobb_analysis/ambertools/cpptraj_mask.py CpptrajMask   53 5 0   91%
biobb_analysis/ambertools/cpptraj_mask.py (no class)   18 1 0   94%
biobb_analysis/ambertools/cpptraj_rgyr.py CpptrajRgyr   46 3 0   93%
biobb_analysis/ambertools/cpptraj_rgyr.py (no class)   17 1 0   94%
biobb_analysis/ambertools/cpptraj_rms.py CpptrajRms   60 3 0   95%
biobb_analysis/ambertools/cpptraj_rms.py (no class)   17 1 0   94%
biobb_analysis/ambertools/cpptraj_rmsf.py CpptrajRmsf   54 3 0   94%
biobb_analysis/ambertools/cpptraj_rmsf.py (no class)   17 1 0   94%
biobb_analysis/ambertools/cpptraj_slice.py CpptrajSlice   48 3 0   94%
biobb_analysis/ambertools/cpptraj_slice.py (no class)   17 1 0   94%
biobb_analysis/ambertools/cpptraj_snapshot.py CpptrajSnapshot   46 3 0   93%
biobb_analysis/ambertools/cpptraj_snapshot.py (no class)   17 1 0   94%
biobb_analysis/ambertools/cpptraj_strip.py CpptrajStrip   53 5 0   91%
biobb_analysis/ambertools/cpptraj_strip.py (no class)   18 1 0   94%
biobb_analysis/gromacs/__init__.py (no class)   12 0 0   100%
biobb_analysis/gromacs/common.py (no class)   334 276 0   17%
biobb_analysis/gromacs/gmx_check.py GMXCheck   101 101 0   0%
biobb_analysis/gromacs/gmx_check.py (no class)   18 2 0   89%
biobb_analysis/gromacs/gmx_cluster.py GMXCluster   55 55 0   0%
biobb_analysis/gromacs/gmx_cluster.py (no class)   17 2 0   88%
biobb_analysis/gromacs/gmx_energy.py GMXEnergy   37 37 0   0%
biobb_analysis/gromacs/gmx_energy.py (no class)   17 2 0   88%
biobb_analysis/gromacs/gmx_image.py GMXImage   67 67 0   0%
biobb_analysis/gromacs/gmx_image.py (no class)   16 2 0   88%
biobb_analysis/gromacs/gmx_rgyr.py GMXRgyr   33 33 0   0%
biobb_analysis/gromacs/gmx_rgyr.py (no class)   16 2 0   88%
biobb_analysis/gromacs/gmx_rms.py GMXRms   33 33 0   0%
biobb_analysis/gromacs/gmx_rms.py (no class)   16 2 0   88%
biobb_analysis/gromacs/gmx_rmsf.py GMXRmsf   33 33 0   0%
biobb_analysis/gromacs/gmx_rmsf.py (no class)   16 2 0   88%
biobb_analysis/gromacs/gmx_trjconv_str.py GMXTrjConvStr   45 45 0   0%
biobb_analysis/gromacs/gmx_trjconv_str.py (no class)   16 2 0   88%
biobb_analysis/gromacs/gmx_trjconv_str_ens.py GMXTrjConvStrEns   52 52 0   0%
biobb_analysis/gromacs/gmx_trjconv_str_ens.py (no class)   16 2 0   88%
biobb_analysis/gromacs/gmx_trjconv_trj.py GMXTrjConvTrj   61 61 0   0%
biobb_analysis/gromacs/gmx_trjconv_trj.py (no class)   16 2 0   88%
biobb_analysis/test/__init__.py (no class)   0 0 0   100%
biobb_analysis/test/unitests/test_ambertools/test_cpptraj_average.py TestCpptrajAverage   6 0 0   100%
biobb_analysis/test/unitests/test_ambertools/test_cpptraj_average.py (no class)   6 0 0   100%
biobb_analysis/test/unitests/test_ambertools/test_cpptraj_bfactor.py TestCpptrajBfactorFirst   6 0 0   100%
biobb_analysis/test/unitests/test_ambertools/test_cpptraj_bfactor.py TestCpptrajBfactorAverage   6 0 0   100%
biobb_analysis/test/unitests/test_ambertools/test_cpptraj_bfactor.py TestCpptrajBfactorExperimental   6 0 0   100%
biobb_analysis/test/unitests/test_ambertools/test_cpptraj_bfactor.py (no class)   14 0 0   100%
biobb_analysis/test/unitests/test_ambertools/test_cpptraj_cluster.py TestCpptrajCluster   12 0 0   100%
biobb_analysis/test/unitests/test_ambertools/test_cpptraj_cluster.py (no class)   6 0 0   100%
biobb_analysis/test/unitests/test_ambertools/test_cpptraj_convert.py TestCpptrajConvert   6 0 0   100%
biobb_analysis/test/unitests/test_ambertools/test_cpptraj_convert.py (no class)   6 0 0   100%
biobb_analysis/test/unitests/test_ambertools/test_cpptraj_dry.py TestCpptrajDry   6 0 0   100%
biobb_analysis/test/unitests/test_ambertools/test_cpptraj_dry.py (no class)   6 0 0   100%
biobb_analysis/test/unitests/test_ambertools/test_cpptraj_image.py TestCpptrajImage   6 0 0   100%
biobb_analysis/test/unitests/test_ambertools/test_cpptraj_image.py (no class)   6 0 0   100%
biobb_analysis/test/unitests/test_ambertools/test_cpptraj_input.py TestCpptrajInput   6 0 0   100%
biobb_analysis/test/unitests/test_ambertools/test_cpptraj_input.py (no class)   6 0 0   100%
biobb_analysis/test/unitests/test_ambertools/test_cpptraj_mask.py TestCpptrajMask   6 0 0   100%
biobb_analysis/test/unitests/test_ambertools/test_cpptraj_mask.py (no class)   6 0 0   100%
biobb_analysis/test/unitests/test_ambertools/test_cpptraj_rgyr.py TestCpptrajRgyr   6 0 0   100%
biobb_analysis/test/unitests/test_ambertools/test_cpptraj_rgyr.py (no class)   6 0 0   100%
biobb_analysis/test/unitests/test_ambertools/test_cpptraj_rms.py TestCpptrajRmsFirst   8 0 0   100%
biobb_analysis/test/unitests/test_ambertools/test_cpptraj_rms.py TestCpptrajRmsAverage   8 0 0   100%
biobb_analysis/test/unitests/test_ambertools/test_cpptraj_rms.py TestCpptrajRmsExperimental   8 0 0   100%
biobb_analysis/test/unitests/test_ambertools/test_cpptraj_rms.py (no class)   14 0 0   100%
biobb_analysis/test/unitests/test_ambertools/test_cpptraj_rmsf.py TestCpptrajRmsfFirst   6 0 0   100%
biobb_analysis/test/unitests/test_ambertools/test_cpptraj_rmsf.py TestCpptrajRmsfAverage   6 0 0   100%
biobb_analysis/test/unitests/test_ambertools/test_cpptraj_rmsf.py TestCpptrajRmsfExperimental   6 0 0   100%
biobb_analysis/test/unitests/test_ambertools/test_cpptraj_rmsf.py (no class)   14 0 0   100%
biobb_analysis/test/unitests/test_ambertools/test_cpptraj_slice.py TestCpptrajSlice   6 0 0   100%
biobb_analysis/test/unitests/test_ambertools/test_cpptraj_slice.py (no class)   6 0 0   100%
biobb_analysis/test/unitests/test_ambertools/test_cpptraj_snapshot.py TestCpptrajSnapshot   6 0 0   100%
biobb_analysis/test/unitests/test_ambertools/test_cpptraj_snapshot.py (no class)   6 0 0   100%
biobb_analysis/test/unitests/test_ambertools/test_cpptraj_strip.py TestCpptrajStrip   6 0 0   100%
biobb_analysis/test/unitests/test_ambertools/test_cpptraj_strip.py (no class)   6 0 0   100%
Total     2517 974 0   61%

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