Coverage report: 79%

Files Functions Classes

coverage.py v7.6.4, created at 2024-11-14 14:38 +0000

File class statements missing excluded coverage
biobb_analysis/__init__.py (no class) 4 0 0 100%
biobb_analysis/ambertools/__init__.py (no class) 14 0 0 100%
biobb_analysis/ambertools/common.py (no class) 219 76 0 65%
biobb_analysis/ambertools/cpptraj_average.py CpptrajAverage 52 3 0 94%
biobb_analysis/ambertools/cpptraj_average.py (no class) 29 11 0 62%
biobb_analysis/ambertools/cpptraj_bfactor.py CpptrajBfactor 57 3 0 95%
biobb_analysis/ambertools/cpptraj_bfactor.py (no class) 30 12 0 60%
biobb_analysis/ambertools/cpptraj_convert.py CpptrajConvert 51 3 0 94%
biobb_analysis/ambertools/cpptraj_convert.py (no class) 29 11 0 62%
biobb_analysis/ambertools/cpptraj_dry.py CpptrajDry 55 3 0 95%
biobb_analysis/ambertools/cpptraj_dry.py (no class) 29 11 0 62%
biobb_analysis/ambertools/cpptraj_image.py CpptrajImage 55 3 0 95%
biobb_analysis/ambertools/cpptraj_image.py (no class) 29 11 0 62%
biobb_analysis/ambertools/cpptraj_input.py CpptrajInput 28 1 0 96%
biobb_analysis/ambertools/cpptraj_input.py (no class) 25 10 0 60%
biobb_analysis/ambertools/cpptraj_mask.py CpptrajMask 56 5 0 91%
biobb_analysis/ambertools/cpptraj_mask.py (no class) 29 11 0 62%
biobb_analysis/ambertools/cpptraj_rgyr.py CpptrajRgyr 49 3 0 94%
biobb_analysis/ambertools/cpptraj_rgyr.py (no class) 29 11 0 62%
biobb_analysis/ambertools/cpptraj_rms.py CpptrajRms 63 3 0 95%
biobb_analysis/ambertools/cpptraj_rms.py (no class) 31 13 0 58%
biobb_analysis/ambertools/cpptraj_rmsf.py CpptrajRmsf 57 3 0 95%
biobb_analysis/ambertools/cpptraj_rmsf.py (no class) 30 12 0 60%
biobb_analysis/ambertools/cpptraj_slice.py CpptrajSlice 51 3 0 94%
biobb_analysis/ambertools/cpptraj_slice.py (no class) 29 11 0 62%
biobb_analysis/ambertools/cpptraj_snapshot.py CpptrajSnapshot 49 3 0 94%
biobb_analysis/ambertools/cpptraj_snapshot.py (no class) 29 11 0 62%
biobb_analysis/ambertools/cpptraj_strip.py CpptrajStrip 56 5 0 91%
biobb_analysis/ambertools/cpptraj_strip.py (no class) 29 11 0 62%
biobb_analysis/gromacs/__init__.py (no class) 10 0 0 100%
biobb_analysis/gromacs/common.py (no class) 315 124 0 61%
biobb_analysis/gromacs/gmx_cluster.py GMXCluster 55 5 0 91%
biobb_analysis/gromacs/gmx_cluster.py (no class) 31 15 0 52%
biobb_analysis/gromacs/gmx_energy.py GMXEnergy 40 3 0 92%
biobb_analysis/gromacs/gmx_energy.py (no class) 28 10 0 64%
biobb_analysis/gromacs/gmx_image.py GMXImage 68 19 0 72%
biobb_analysis/gromacs/gmx_image.py (no class) 28 12 0 57%
biobb_analysis/gromacs/gmx_rgyr.py GMXRgyr 34 2 0 94%
biobb_analysis/gromacs/gmx_rgyr.py (no class) 28 12 0 57%
biobb_analysis/gromacs/gmx_rms.py GMXRms 34 2 0 94%
biobb_analysis/gromacs/gmx_rms.py (no class) 28 12 0 57%
biobb_analysis/gromacs/gmx_trjconv_str.py GMXTrjConvStr 46 8 0 83%
biobb_analysis/gromacs/gmx_trjconv_str.py (no class) 28 12 0 57%
biobb_analysis/gromacs/gmx_trjconv_str_ens.py GMXTrjConvStrEns 53 4 0 92%
biobb_analysis/gromacs/gmx_trjconv_str_ens.py (no class) 28 12 0 57%
biobb_analysis/gromacs/gmx_trjconv_trj.py GMXTrjConvTrj 50 10 0 80%
biobb_analysis/gromacs/gmx_trjconv_trj.py (no class) 28 12 0 57%
biobb_analysis/test/__init__.py (no class) 0 0 0 100%
biobb_analysis/test/unitests/test_ambertools/test_cpptraj_average.py TestCpptrajAverage 6 0 0 100%
biobb_analysis/test/unitests/test_ambertools/test_cpptraj_average.py (no class) 6 0 0 100%
biobb_analysis/test/unitests/test_ambertools/test_cpptraj_bfactor.py TestCpptrajBfactorFirst 6 0 0 100%
biobb_analysis/test/unitests/test_ambertools/test_cpptraj_bfactor.py TestCpptrajBfactorAverage 6 0 0 100%
biobb_analysis/test/unitests/test_ambertools/test_cpptraj_bfactor.py TestCpptrajBfactorExperimental 6 0 0 100%
biobb_analysis/test/unitests/test_ambertools/test_cpptraj_bfactor.py (no class) 14 0 0 100%
biobb_analysis/test/unitests/test_ambertools/test_cpptraj_convert.py TestCpptrajConvert 6 0 0 100%
biobb_analysis/test/unitests/test_ambertools/test_cpptraj_convert.py (no class) 6 0 0 100%
biobb_analysis/test/unitests/test_ambertools/test_cpptraj_dry.py TestCpptrajDry 6 0 0 100%
biobb_analysis/test/unitests/test_ambertools/test_cpptraj_dry.py (no class) 6 0 0 100%
biobb_analysis/test/unitests/test_ambertools/test_cpptraj_image.py TestCpptrajImage 6 0 0 100%
biobb_analysis/test/unitests/test_ambertools/test_cpptraj_image.py (no class) 6 0 0 100%
biobb_analysis/test/unitests/test_ambertools/test_cpptraj_input.py TestCpptrajInput 6 0 0 100%
biobb_analysis/test/unitests/test_ambertools/test_cpptraj_input.py (no class) 6 0 0 100%
biobb_analysis/test/unitests/test_ambertools/test_cpptraj_mask.py TestCpptrajMask 6 0 0 100%
biobb_analysis/test/unitests/test_ambertools/test_cpptraj_mask.py (no class) 6 0 0 100%
biobb_analysis/test/unitests/test_ambertools/test_cpptraj_rgyr.py TestCpptrajRgyr 6 0 0 100%
biobb_analysis/test/unitests/test_ambertools/test_cpptraj_rgyr.py (no class) 6 0 0 100%
biobb_analysis/test/unitests/test_ambertools/test_cpptraj_rms.py TestCpptrajRmsFirst 8 0 0 100%
biobb_analysis/test/unitests/test_ambertools/test_cpptraj_rms.py TestCpptrajRmsAverage 8 0 0 100%
biobb_analysis/test/unitests/test_ambertools/test_cpptraj_rms.py TestCpptrajRmsExperimental 8 0 0 100%
biobb_analysis/test/unitests/test_ambertools/test_cpptraj_rms.py (no class) 14 0 0 100%
biobb_analysis/test/unitests/test_ambertools/test_cpptraj_rmsf.py TestCpptrajRmsfFirst 6 0 0 100%
biobb_analysis/test/unitests/test_ambertools/test_cpptraj_rmsf.py TestCpptrajRmsfAverage 6 0 0 100%
biobb_analysis/test/unitests/test_ambertools/test_cpptraj_rmsf.py TestCpptrajRmsfExperimental 6 0 0 100%
biobb_analysis/test/unitests/test_ambertools/test_cpptraj_rmsf.py (no class) 14 0 0 100%
biobb_analysis/test/unitests/test_ambertools/test_cpptraj_slice.py TestCpptrajSlice 6 0 0 100%
biobb_analysis/test/unitests/test_ambertools/test_cpptraj_slice.py (no class) 6 0 0 100%
biobb_analysis/test/unitests/test_ambertools/test_cpptraj_snapshot.py TestCpptrajSnapshot 6 0 0 100%
biobb_analysis/test/unitests/test_ambertools/test_cpptraj_snapshot.py (no class) 6 0 0 100%
biobb_analysis/test/unitests/test_ambertools/test_cpptraj_strip.py TestCpptrajStrip 6 0 0 100%
biobb_analysis/test/unitests/test_ambertools/test_cpptraj_strip.py (no class) 6 0 0 100%
biobb_analysis/test/unitests/test_gromacs/test_gmx_cluster.py TestGMXCluster 5 0 0 100%
biobb_analysis/test/unitests/test_gromacs/test_gmx_cluster.py (no class) 6 0 0 100%
biobb_analysis/test/unitests/test_gromacs/test_gmx_energy.py TestGMXEnergy 6 0 0 100%
biobb_analysis/test/unitests/test_gromacs/test_gmx_energy.py (no class) 6 0 0 100%
biobb_analysis/test/unitests/test_gromacs/test_gmx_image.py TestGMXImage 6 0 0 100%
biobb_analysis/test/unitests/test_gromacs/test_gmx_image.py (no class) 6 0 0 100%
biobb_analysis/test/unitests/test_gromacs/test_gmx_rgyr.py TestGMXRgyr 6 0 0 100%
biobb_analysis/test/unitests/test_gromacs/test_gmx_rgyr.py (no class) 6 0 0 100%
biobb_analysis/test/unitests/test_gromacs/test_gmx_rms.py TestGMXRms 7 1 0 86%
biobb_analysis/test/unitests/test_gromacs/test_gmx_rms.py (no class) 7 0 0 100%
biobb_analysis/test/unitests/test_gromacs/test_gmx_trjconv_str.py TestGMXTrjConvStr 6 0 0 100%
biobb_analysis/test/unitests/test_gromacs/test_gmx_trjconv_str.py (no class) 6 0 0 100%
biobb_analysis/test/unitests/test_gromacs/test_gmx_trjconv_str_ens.py TestGMXTrjConvStrEns 6 0 0 100%
biobb_analysis/test/unitests/test_gromacs/test_gmx_trjconv_str_ens.py (no class) 6 0 0 100%
biobb_analysis/test/unitests/test_gromacs/test_gmx_trjconv_trj.py TestGMXTrjConvTrj 6 0 0 100%
biobb_analysis/test/unitests/test_gromacs/test_gmx_trjconv_trj.py (no class) 6 0 0 100%
Total   2544 538 0 79%

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